Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2434 ATGGCTAAGATTCCTAATACTGTATTCTCTTTGAGACACTTCTTGGTGCTATCCCTCGCTTTGAACGTGAGTTTCATACTCCGAATGTTTTATGATGGTGAAGTTGGCCATAACAACTCTTCCTTGAATAGAGCTAAAGCTAATAATAATGTTCACAAATCACGTGTGGTTATGTCATCCACTTCTTCTTTGAAGAATTCTACTTGTAAAGATCTTACAGGAAGCAAGAACAGAATCATAAATCTTGACCATGGGGATCCGACAGTATATGAAAGATTTTGGAGACAAACAGGTGACAAGAGCACGATCATAATACCAGGATGGCAATCCATGAGCTATTTTTCGGATGTGTCGAACATATGTTGGTTTCTTGAGGCAGAGTTTGCAAAGGAGGTAGTGAGGTTGCACAGAGTGGTCGGGAATGCAGTCACAGAAGGACGTCACATTGTTGTAGGGACAGGTTCCTCTCAACTTTTTCTTGCTGCACTCTATGCTCTCTCCCCAAATCATGCATCTCAACCAATCAACGTTGTTTGTGCCTCACCCTACTACTCTTCATACCCATCAATGACAGATTACCTAAAGTCTGGGCTATACAAATGGGCCGGTGATGCAGATAGTTATGAGAAAGATGGTCCCTACATTGAGCTGGTAACTTCACCAAATAATCCTGATGGACATGTGAGGAAGTCTAAGGTCAATAGAAGTCAAGGACTTCTGGTTCATGATCTTGCCTACTACTGGCCGCAATACACTCCTATATCATCGCCTTCTGATCATGATCTAACCCTTTTTACTGTCTCCAAAAGCACTGGTCATGCTGGAATGCGCATAGGGTGGGCACTAGTGAAAGACAAAGAGGTAGCAAAGAAAATGACCAAGTTCATAGAGCTAAACACAATAGGAGTCTCAAAGGATTCACAACTCAGGGCTGCAAAGATTTTAAGTGCAGTTTCTGACAGTTGTGAACAAGAAAACTCCAAAGAGAATGAGTCATTTTTCAAGTTCAGCCACAAGGTCATGGCGAACAGGTGGAAGCAGCTAAGAGAAGTAGTGCATCATAGTGAATTGTTCAGCTTATCCCAATTTTCCCCTGCATTTTGTAACTTTTTCAATCGAGTGTTGGAACCTCAACCAGCTTTTGTGTGGTTGAAGTGTGAGGGAAATGTGGAAGACTGTGAAAGCTTCCTTAGAGCACACAACATCATAACGAGAAGTGGAAAACACTTTGGGGTTAGCCCAAAATATGTAAGAATTAGCTTGTTGGATACTGATGAAAATTTTACTCAATTTCTAGACAGATTATCTACCATACAGTCTTTGTAA 1326 0.4125 MAKIPNTVFSLRHFLVLSLALNVSFILRMFYDGEVGHNNSSLNRAKANNNVHKSRVVMSSTSSLKNSTCKDLTGSKNRIINLDHGDPTVYERFWRQTGDKSTIIIPGWQSMSYFSDVSNICWFLEAEFAKEVVRLHRVVGNAVTEGRHIVVGTGSSQLFLAALYALSPNHASQPINVVCASPYYSSYPSMTDYLKSGLYKWAGDADSYEKDGPYIELVTSPNNPDGHVRKSKVNRSQGLLVHDLAYYWPQYTPISSPSDHDLTLFTVSKSTGHAGMRIGWALVKDKEVAKKMTKFIELNTIGVSKDSQLRAAKILSAVSDSCEQENSKENESFFKFSHKVMANRWKQLREVVHHSELFSLSQFSPAFCNFFNRVLEPQPAFVWLKCEGNVEDCESFLRAHNIITRSGKHFGVSPKYVRISLLDTDENFTQFLDRLSTIQSL* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2434 441 SUPERFAMILY PLP-dependent transferases 77 437 IPR015424 -
Mtr3g2434 441 Gene3D - 124 328 IPR015421 GO:0003824
Mtr3g2434 441 Gene3D - 38 120 IPR037029 GO:0016846
Mtr3g2434 441 Gene3D Aspartate Aminotransferase, domain 1 330 439 IPR015422 GO:0003824
Mtr3g2434 441 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 7 440 - -
Mtr3g2434 441 Pfam Allinase 80 438 IPR006948 GO:0016846
Mtr3g2434 441 CDD AAT_like 127 435 - -
Mtr3g2434 441 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 7 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2434 Mtr-Chr3 38175928 38181830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2434 K16903 - gmx:100820582 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2434 3 38175928 38181830 Mtr3g2434 3 38175928 38181830 ECH
Mtr4g3783 4 51581730 51590626 Mtr3g2434 3 38175928 38181830 PCT