Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3777 ATGATGAAAAGTCCTAACCCTAGCCCTAAACTGGAAGAGGAAAAGAGCCTTGAAGAAGAGCTGTTGATACCGATTTTAATGGGAGAGCAAGTGATAAAATTAGCAGAAGAAGCAAAATCATCAAAAGTTGAATGTCGCGAACTAGCAAAGAAGGTGGAGATACTCTGCAAAAATCTTCGAGGTGTTGTGCGAGTGGTGACAGGGAGCCATCAATCGTTAAACGATAGACCAATCCGACGCATGGTGAGAGAATTATCAAAGAATCTAGAAAAAACGCTTGCACTTGTGCGGAGGTGCAAAAGTCAAGGTGTCAATGTCCTGAGGAATGTGTTAACCATGAGTAGTACTGGTGATTTTCGAAAAGTTTGGAATCTTCTAGAATCTTCTAACGGTGATATGATGTGGTTGTTGAGCATATTTGAGTCTAAAGGGACTAATCTTTCGATATCTCCAATTGCAAGTAATGATCCAATCTTGGCTTGGGTGTGGACTTCAATTTATACCCTTCAGCTTGGTAACCCTAAGGATCGTGTTGAAGCCGCTAATGAATTGGGTTCTCTTGCTAAAGATAATGATCGGAACAAGTTCATCATTGTGGAAGAAGGTGGTGTTTTGCCTCTACTGAAGGTTCTTAAGGATTCTGCTTTCCCTGATTCTCAAGTTGCAGCTGCTAATGCTCTCACCAGCATTATTTCTGGTGATCATGATCAACAAAGGTTCGTTCAATTCCTTCTCAGCAACCTCGCGGTTCCTGTTATTGTTCAGGTTCTATCGGATGCAGTATTCAGAGTCCGTGTTTCGGTTGCTAATTTGGTATCTGCTATGGCTGATCAAGAGCCTCTTGCTCGTGAGGAGTTTATAAGGGCTAATGTGACCAAACCACTTGTGTTGTTTATGTCTTTGGATACTGTTCTTAACAAACCTATCGCTGCTCGAAGTGGACTTCATTCGGTGGTTCAAAATTTGTCTGAGGTTGATTCTGATGGAAGCAACTGCAGAGGAAGAGAAGCTGATCAGAGCCCTGAGTTGAGGAATGATGTTAAAGTCAGTTGTGCTAAGGCTCTTTGGAAACTCTCCAAAGGGTGTCTTTTAGCTTGTAAGAGGATTACTGAAACTAAAGGCTTGATTTGTCTGGCTAAGATGATTGAATCTGAGAGTGGAGAATTGAGGCTCAATTGTCTCATGGCTGTTATGGAAATTACGGCTGTGGCAGAGTCCAATGCTGATCTTAGAAGAGGTGCTTTCAAGCCTACAGCACCGGTTGCAAAGGCTGTTTTGGATCAGCTTTTTAAGGTGGTTCGAGAAGAGCGCGATTCAACATTGCTGATTCCTGCTATTAAGTCAATTGGGTCATTGGCCAGAAACTTTCCTGGTAAGGTTCCTCATGTTCTTGGTCCTTTAGTTGCACACCTTGGAAACAAGGATATAAATGTGGCTAGTGAAGTTATTGTTGCCTTGATAAAATTTGTGTGCACCGACAATTATAACCGTGTCGACCATTCTAAGGCAATACTTGAGCTTGATGGAATTCCTAAGCTAATGAGTCTGCTGAAGATAAAGGATGGTCATCAAGTGTATGGCCTAAAATTACTTTGTTATCTTGCCTTAAATGTTGGCAATAGTAAGGTTCTTGAGCAAGAACGTGTATTGAGTACTATAGAGAAACTTGCTCGTCCGGTTCTAGCTCAAAATCCTGATTTGAAGGAACTGTTTGCAAACGCTATACACCACCTATCGCTTTATCAGTCGGGTGTTCAATTGCACAGACATCCTTTGGGATTGGGGCTATAA 1791 0.4193 MMKSPNPSPKLEEEKSLEEELLIPILMGEQVIKLAEEAKSSKVECRELAKKVEILCKNLRGVVRVVTGSHQSLNDRPIRRMVRELSKNLEKTLALVRRCKSQGVNVLRNVLTMSSTGDFRKVWNLLESSNGDMMWLLSIFESKGTNLSISPIASNDPILAWVWTSIYTLQLGNPKDRVEAANELGSLAKDNDRNKFIIVEEGGVLPLLKVLKDSAFPDSQVAAANALTSIISGDHDQQRFVQFLLSNLAVPVIVQVLSDAVFRVRVSVANLVSAMADQEPLAREEFIRANVTKPLVLFMSLDTVLNKPIAARSGLHSVVQNLSEVDSDGSNCRGREADQSPELRNDVKVSCAKALWKLSKGCLLACKRITETKGLICLAKMIESESGELRLNCLMAVMEITAVAESNADLRRGAFKPTAPVAKAVLDQLFKVVREERDSTLLIPAIKSIGSLARNFPGKVPHVLGPLVAHLGNKDINVASEVIVALIKFVCTDNYNRVDHSKAILELDGIPKLMSLLKIKDGHQVYGLKLLCYLALNVGNSKVLEQERVLSTIEKLARPVLAQNPDLKELFANAIHHLSLYQSGVQLHRHPLGLGL* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3777 596 Gene3D - 164 414 IPR011989 -
Mtr4g3777 596 PANTHER ARMADILLO REPEAT ONLY 1 PROTEIN 12 592 - -
Mtr4g3777 596 SUPERFAMILY ARM repeat 172 581 IPR016024 -
Mtr4g3777 596 Gene3D - 24 139 IPR036537 GO:0007166
Mtr4g3777 596 PANTHER ARMADILLO REPEAT ONLY 4 12 592 - -
Mtr4g3777 596 SMART arm_5 537 580 IPR000225 GO:0005515
Mtr4g3777 596 SMART arm_5 190 232 IPR000225 GO:0005515
Mtr4g3777 596 SMART arm_5 497 536 IPR000225 GO:0005515
Mtr4g3777 596 Gene3D - 415 588 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3777 Mtr-Chr4 51518562 51521935 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3777 - - gmx:100813824 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3777 4 51518562 51521935 Mtr4g3777 4 51518562 51521935 ECH
Mtr4g3777 4 51518562 51521935 Mtr3g2428 3 38100007 38107195 PCT