Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2428 ATGGCCTCAGCTTCGCAAAAGACGACGTCATCACCGTCTTCTTCTTGTTGTACCCCTCTCGACTCTTCCCGCTTAGCTGCTGTCTCCGCCGCCCCCGCCGTTGCTCAATCCGATCACGTTGCTTTGATTCGTCCGCTTGATTCGCTTCCTGAACCTTCTAGTACCAATGCTCCCACTTCTAAGGGAATCACGTCAATGACAAGGCCTCAGTCAAGCCATCCTTTGGACCCTCTATCTGCAGCTGAAATTTCTGTGGCAGTGGCAACTGTTAGGGCTGCTGGAGCTACTCCAGAGCTTAGAGATAGTATGCGCTTCATTGAAGTAGTTTTGCTGGAACCAGATAAACATGTTGTTGCACTAGCAGATGCTTATTTTTTTCCACCTTTTCAACCATCATTACTTCCTAGAAGTAAAGGAGGACCTGTAATTCCCACAAAACTTCCTCCAAGATGCGCTAGACTTGTTGTTTACAATAAGAAATCAAATGAGACTACTCTGTGGATTGTTGAGTTATCACAAGTGCATGCAGTAACTCGAGGTGGCCATCATCGAGGAAAAGTAATTTCATCAAATGTTGTTCCTGATGTTCAGCCTCCAATGGATGCTGAGGAATATGCAGAATGCGAGGCTGTTGTTAAAAGTTTTCCCCCTTTTATAGAGGCTATGAAGAAAAGGGGTATTGAAGACATGGATCTTGTAATGGTTGATCCCTGGTGTGTCGGTTATCATAGTGAAGCTGATGCTCCTGGTCGAAGACTTGCTAAACCACTCTTATTTTGTCGATCTGAGAGCGACTGCCCTATGGAAAATGGTTATGCCCGCCCAGTTGAGGGCATCTATGTTCTTGTTGATATGCAAAACATGGTGGTGATAGAGTTTGAAGACCGTAAACTTGTTCCTCTGCCTCCAGTTGATCCCTTGAGGAACTATACTCCTGGTGAATCCAGAGGTGGTTCCGATAGAAGTGATGTGAAACCTTTACAAATTATTCAACCTGAAGGTCCAAGCTTTCGTGTCAATGGGTATTATGTTGAATGGCAGAAGTGGAATTTTCGTATTGGATTCACACCCAAAGAAGGTTTGATTATATATTCTGTTGCATATGTTGATGGTAGTCGAGGGAGAAGGCCTGTGGCTCATAGGCTGAGTTTTGTGGAGATGGTTGTACCCTATGGAGATCCAACTGAACCACATTATAGGAAAAATGCTTTTGATGCCGGCGAGGATGGCTTGGGAAAAAATGCACATTCCCTCAAGAAGGGATGTGATTGTTTGGGCTATATCAAATATTTTGATGCTCACTTCACAAATTTCACTGGTGGAGTTGAAACTATCGAAAATTGTGTATGTTTGCATGAAGAGGATCATGGGATTCTCTGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTCCGGAGGTCCAGAAGACTTTCAGTTTCTTTTGTATGCACAGTGGCCAATTATGAGTACGCATTTTTTTGGCACTTTTATCAGGATGGAAAGATTGAAGCTGAAGTCAAGCTGACTGGAATTCTCAGCTTAGGAGCCTTGATGCCTGGAGAAGTTCGAAAATATGGAACCATGATTGCACCAGGTCTATATGCTCCAGTTCATCAACACTTTTTCGTTGCTCGCATGGACATGTCTGTTGATTCTAGACCTGGTGAAGCTTTGAATCAGGTTGTGGAGGTCAATATGAAAGTTGAAGAACCTGGTGAGAAAAATATTCACAATAATGCGTTCTATGCCGAAGAGACTTTGCTCAGGTCTGAATTGGAAGCAATGCGTGATTGCAATCCTTTGACTGCTCGACATTGGATTGTAAGGAACACAAGAACTGGCAATAGAACTGGACAATTGACAGGCTACAAGCTGGTACCAGGTTCAAACTGCTTACCATTGGCAGGTTCTGAGGCCAAGTTTTTAAGAAGAGCTGCTTTCTTGAAGCATAATGTTTGGGTAACAGCATATTCACGTGATGAAATGTTTCCTGGAGGAGAATTTCCTAATCAAAATCCACGAGTTGGCGAAGGACTAGCTACATGGATTAAGCAAAACCGGTCTTTGGAAGAAACTAATATAGTTCTATGGTATGTATTTGGAATCACACATGTTCCTCGTCTAGAAGACTGGCCTGTTATGCCAGTAGAACACATTGGTTTTATGCTCATGCCTCATGGATTCTTCAATTGTTCTCCTGCAGTAGATGTCCCACCTAATTCATGTGAAGTGGAATCTAAAGACAGTGATATCAAGGATAACGGTGCTTCAAAGCCAATTCAGGGCGGGATAGCGTCGAAGCTTTAG 2310 0.4346 MASASQKTTSSPSSSCCTPLDSSRLAAVSAAPAVAQSDHVALIRPLDSLPEPSSTNAPTSKGITSMTRPQSSHPLDPLSAAEISVAVATVRAAGATPELRDSMRFIEVVLLEPDKHVVALADAYFFPPFQPSLLPRSKGGPVIPTKLPPRCARLVVYNKKSNETTLWIVELSQVHAVTRGGHHRGKVISSNVVPDVQPPMDAEEYAECEAVVKSFPPFIEAMKKRGIEDMDLVMVDPWCVGYHSEADAPGRRLAKPLLFCRSESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPVDPLRNYTPGESRGGSDRSDVKPLQIIQPEGPSFRVNGYYVEWQKWNFRIGFTPKEGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPTEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFVCTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALMPGEVRKYGTMIAPGLYAPVHQHFFVARMDMSVDSRPGEALNQVVEVNMKVEEPGEKNIHNNAFYAEETLLRSELEAMRDCNPLTARHWIVRNTRTGNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNVWVTAYSRDEMFPGGEFPNQNPRVGEGLATWIKQNRSLEETNIVLWYVFGITHVPRLEDWPVMPVEHIGFMLMPHGFFNCSPAVDVPPNSCEVESKDSDIKDNGASKPIQGGIASKL* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2428 769 SUPERFAMILY Amine oxidase catalytic domain 321 740 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Mtr3g2428 769 MobiDBLite consensus disorder prediction 1 20 - -
Mtr3g2428 769 MobiDBLite consensus disorder prediction 743 769 - -
Mtr3g2428 769 Gene3D - 57 200 - -
Mtr3g2428 769 Gene3D - 202 305 - -
Mtr3g2428 769 SUPERFAMILY Amine oxidase N-terminal region 197 314 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Mtr3g2428 769 Gene3D Copper amine oxidase, catalytic domain 314 740 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Mtr3g2428 769 PANTHER AMINE OXIDASE 1 762 - -
Mtr3g2428 769 MobiDBLite consensus disorder prediction 49 74 - -
Mtr3g2428 769 Pfam Copper amine oxidase, N3 domain 198 301 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Mtr3g2428 769 Pfam Copper amine oxidase, N2 domain 73 172 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Mtr3g2428 769 MobiDBLite consensus disorder prediction 45 75 - -
Mtr3g2428 769 PANTHER COPPER AMINE OXIDASE 1 762 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Mtr3g2428 769 SUPERFAMILY Amine oxidase N-terminal region 71 199 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Mtr3g2428 769 Pfam Copper amine oxidase, enzyme domain 327 735 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2428 Mtr-Chr3 38100007 38107195 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2428 K00276 - gmx:100798722 1390.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2428 3 38100007 38107195 Mtr3g2428 3 38100007 38107195 ECH
Mtr4g3777 4 51518562 51521935 Mtr3g2428 3 38100007 38107195 PCT