Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3592 ATGGCTTCTCCCCTGTTATTTCTCCTCCTCATCACACTCTTCATTTCACATTCTTCATCTCAAATGCTACTATTACCTCTAACACACTCACTCTCCATGATAGAATTCAACACAACCCACCACCTCCTTAAATCCACCTCAACTCACTCATTATCACGCTTCCACCGCCATAAACACCACCACCACAACCAACTCTCTCTCCCACTCTCACCAGGCTCCGATTACACTCTCTCCTTCAACCTCGGACCCCACTCCCAACCCATAACTCTCTACATGGACACAGGAAGTGACCTTGTTTGGTTCCCATGCACACCGTTCAACTGCATCCTCTGTGAATTAAAACCCAAGCTTACCTCGGATCCCTCTCCCCCTACCAACATCTCCCACAGCACCCCCATTTCATGCAACTCCCATGCATGCTCTGTAGCACACAGTTCCACCCCCTCTTCCGATCTATGCACAATGGCTCATTGCCCTTTAGACTCCATTGAAACCAAAGACTGCGGTTCATTTCACTGTCCACCATTCTACTACGCTTACGGCGATGGAAGCTTAATAGCTTCTCTCTATCGCGATACACTTTCTCTTTCTACTCTTCAACTTACAAACTTCACATTCGGTTGTGCTCATACAACTTTCTCCGAACCCACCGGAGTCGCTGGCTTCGGTCGTGGATTACTTTCTCTCCCAGCTCAGTTAGCTACTCACTCTCCTCAACTTGGAAACCGTTTTTCTTATTGTTTGGTTTCTCATTCTTTTCGTTCTGAACGAATTCGAAAACCAAGTCCACTCATATTAGGTCGTTACAATGATGAAAAACAGAGCAATGGTGATGAAGTTGTTGAGTTTGTTTATACTTCAATGCTTGAAAATCCAAAACATTCTTATTTTTACACTGTTGGCTTGAAAGGAATCTCTGTCGGAAAAAAGACCGTTCCAGCACCAAAGATTTTACGGAGGGTGAATAAGAAAGGTGACGGCGGTGTAGTAGTGGATTCCGGCACGACATTTACGATGTTACCGGAGAAATTTTATAACTCGGTGGTGGAAGGGTTTGACCGTCGTGCTAGGAAATCTAACCGGAGGGCGCCTGAGATTGAACAGAAAACTGGGCTTTCACCATGTTATTATTTGAACACGGCGGCGATAGTGCCGGCGGTGACGCTGCGTTTTGTTGGGATGAATTCGAGTGTGGTGTTGCCTAGGAAGAATTATTTTTACGAATTTATGGACGGTGGAGATGGAGTGAGGAGGAAAGAGAGAGTGGGGTGTTTGATGTTTATGAACGGTGGAGATGAAGCTGAAATGAGCGGTGGGCCCGGAGGAGTACTTGGGAATTATCAACAGCAAGGGTTTGAAGTTGAATATGATCTTGAAAAGAAGCGCGTGGGTTTTGCTAGGAGAAAGTGCGCGTCGCTTTGGGATAGACTCAATCGCGACAAAAACTAG 1449 0.4596 MASPLLFLLLITLFISHSSSQMLLLPLTHSLSMIEFNTTHHLLKSTSTHSLSRFHRHKHHHHNQLSLPLSPGSDYTLSFNLGPHSQPITLYMDTGSDLVWFPCTPFNCILCELKPKLTSDPSPPTNISHSTPISCNSHACSVAHSSTPSSDLCTMAHCPLDSIETKDCGSFHCPPFYYAYGDGSLIASLYRDTLSLSTLQLTNFTFGCAHTTFSEPTGVAGFGRGLLSLPAQLATHSPQLGNRFSYCLVSHSFRSERIRKPSPLILGRYNDEKQSNGDEVVEFVYTSMLENPKHSYFYTVGLKGISVGKKTVPAPKILRRVNKKGDGGVVVDSGTTFTMLPEKFYNSVVEGFDRRARKSNRRAPEIEQKTGLSPCYYLNTAAIVPAVTLRFVGMNSSVVLPRKNYFYEFMDGGDGVRRKERVGCLMFMNGGDEAEMSGGPGGVLGNYQQQGFEVEYDLEKKRVGFARRKCASLWDRLNRDKN* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3592 482 Coils Coil 474 482 - -
Mtr4g3592 482 Pfam Xylanase inhibitor C-terminal 298 466 IPR032799 -
Mtr4g3592 482 SUPERFAMILY Acid proteases 70 475 IPR021109 -
Mtr4g3592 482 Gene3D Acid Proteases 272 474 IPR021109 -
Mtr4g3592 482 PANTHER BNAA01G17170D PROTEIN 1 475 - -
Mtr4g3592 482 Gene3D Acid Proteases 62 267 IPR021109 -
Mtr4g3592 482 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 329 340 IPR001969 GO:0004190|GO:0006508
Mtr4g3592 482 ProSiteProfiles Peptidase family A1 domain profile. 75 466 IPR033121 -
Mtr4g3592 482 CDD pepsin_A_like_plant 75 470 IPR034161 -
Mtr4g3592 482 Pfam Xylanase inhibitor N-terminal 75 267 IPR032861 -
Mtr4g3592 482 PANTHER OS07G0603500 PROTEIN-RELATED 1 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3592 Mtr-Chr4 49648696 49650522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3592 75 473 Miscellaneous Gene Families AT1G77480 23.653 1.97e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3592 - - gmx:100805699 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3592 4 49648696 49650522 Mtr4g3592 4 49648696 49650522 ECH
Mtr5g0411 5 3760173 3762124 Mtr4g3592 4 49648696 49650522 PCT