Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1969 ATGGCACCATTTAATTTCAACGTGTTTATGTTACTCTCTCTTTTATCCATTGTTGTTACTCATATTGATGCTATTAAACCTCTTCATCTTCAAGAATTTTCTGATTTCAATCGGACCAGTTTCCCACCAGGCTTTGTTTTTGGAACAGCCTCTTCTGCATTCCAGTATGAAGGTGCAGTAAGAGAAGGTGGAAAAGGACCAAGTATATGGGATACCTTTACTCATAAATACCCAGAAAAAATTAGAGATAGACATAATGGAGATGTAGCCGACGACTCGTATCATCGGTACAAGGAAGATATTGGAATCATGAAGGATTTGAATATGGATGCTTATAGATTTTCAATTTCTTGGTCTAGAGTGCTACCAAAAGGAAAGTTTAGTGGAGGTGTAAACCAGGAGGGAATAAACTACTACAACGACCTCATCAACGAAGTATTGGCTAAAGGTATGCAACCATATGTTACCCTTTTCCATTGGGATGTTCCTCAAGCCTTAGAGGATGAGTATGACGGTTTTTTAAGCCGTCGCATTGTAGATGATTTTAGGGACTATGCTGAACTTTGCTTCAAGGAATTTGGCGATAGGGTGAAACATTGGATTACTTTGAATGAACCATGGAGTGTGAGCATGAATGCTTATGCATATGGAAAGTTTGCACCGGGTCGATGTTCAGATTGGTTAAATCTGAATTGCACAGGTGGTGATTCAGGGACCGAACCATATTTGGCTGCACACTACCAACTTCTCGCTCATGCTGCTGCTGTAAAACTGTACCGGACCAAATATCAGGCATCTCAAAATGGTAAAATAGGGATTACCTTACTCTCCCATTGGTATGAGCCAGCCTCTCAAGCAAAATCAGACGTTGATGCTGCGCTACGAGGCCTTGACTTTATGTTTGGCTGGTATATGCATCCAATCACAAAAGGAAACTATCCAAAAAGCATGCGATCCTTGGTGGGAAACCGGCTACCGAGGTTCTCCAAAAAAGAATCCAAGAATCTTAAAGGGTCCTTCGATTTTCTCGGCCTAAACTATTACTCATCCTTTTATGCTGCTGATGCACCTCACCCACGCAATGCCAGACCAGCCATACAAACTGATTCTCTCATTAATGCTACATTTGAACATAATGGCAAGCCCCTTGGTCCAATGTCTGCTTCCAGTTGGTTATGCATTTATCCACGAGGATTTCGACAATTGTTGCTTTACGTCAAGAAGCATTACAACGACCCCGTAATTTACATTACCGAAAATGGTCGTGATGAATTCAACGATCCAACATTATCACTTGAAGAATCCCTTTTAGATACTGACAGAATTGATTACTTTTATCGTCATCTTTATTATCTTCAAACTGCAATCAGGGATGGCGTGAATGTAAAGGGATACTTTGCGTGGTCGTTGTTGGATAACTTTGAATGGGAATCTGGCTTCAGTTTGCGATTTGGACTCGTCTTTGTGGATTTCAAAGACAACTTGAAAAGACACCCAAAACTCTCCGCGCATTGGTTCAAGAATTTCCTCAAAAGATCTTAG 1542 0.4086 MAPFNFNVFMLLSLLSIVVTHIDAIKPLHLQEFSDFNRTSFPPGFVFGTASSAFQYEGAVREGGKGPSIWDTFTHKYPEKIRDRHNGDVADDSYHRYKEDIGIMKDLNMDAYRFSISWSRVLPKGKFSGGVNQEGINYYNDLINEVLAKGMQPYVTLFHWDVPQALEDEYDGFLSRRIVDDFRDYAELCFKEFGDRVKHWITLNEPWSVSMNAYAYGKFAPGRCSDWLNLNCTGGDSGTEPYLAAHYQLLAHAAAVKLYRTKYQASQNGKIGITLLSHWYEPASQAKSDVDAALRGLDFMFGWYMHPITKGNYPKSMRSLVGNRLPRFSKKESKNLKGSFDFLGLNYYSSFYAADAPHPRNARPAIQTDSLINATFEHNGKPLGPMSASSWLCIYPRGFRQLLLYVKKHYNDPVIYITENGRDEFNDPTLSLEESLLDTDRIDYFYRHLYYLQTAIRDGVNVKGYFAWSLLDNFEWESGFSLRFGLVFVDFKDNLKRHPKLSAHWFKNFLKRS* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1969 513 SUPERFAMILY (Trans)glycosidases 30 511 IPR017853 -
Mtr4g1969 513 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 45 59 IPR033132 -
Mtr4g1969 513 Pfam Glycosyl hydrolase family 1 39 511 IPR001360 GO:0004553|GO:0005975
Mtr4g1969 513 Gene3D Glycosidases 24 512 - -
Mtr4g1969 513 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 20 512 - -
Mtr4g1969 513 PANTHER GLYCOSYL HYDROLASE 20 512 IPR001360 GO:0004553|GO:0005975
Mtr4g1969 513 PRINTS Glycosyl hydrolase family 1 signature 339 353 IPR001360 GO:0004553|GO:0005975
Mtr4g1969 513 PRINTS Glycosyl hydrolase family 1 signature 415 423 IPR001360 GO:0004553|GO:0005975
Mtr4g1969 513 PRINTS Glycosyl hydrolase family 1 signature 438 449 IPR001360 GO:0004553|GO:0005975
Mtr4g1969 513 PRINTS Glycosyl hydrolase family 1 signature 459 476 IPR001360 GO:0004553|GO:0005975
Mtr4g1969 513 PRINTS Glycosyl hydrolase family 1 signature 483 495 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1969 Mtr-Chr4 33136675 33140841 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1969 9 510 Glycoside Hydrolase AT5G44640 53.678 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1969 - K01188 gmx:100801874 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3419 2 48262275 48267517 Mtr4g1969 4 33136675 33140841 PCT