Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3419 ATGGCATTACTCAAAGCCTTTTTAATTTTCACTCTCTTGAATCTCTTGACCACACTGCCATCTATGGAGGCTGTTTCACCAATTCTTGATGTTTCTTCACTTAATCGAACTAGTTTTCCCACAAGCTTCATTTTTGGGACAGGGTCCTCATCATACCAGTACGAAGGTGCTGCTAAAGAAGGTGGGAGAGGAGCAAGTATATGGGACACCTACACTCATAAGTATCCAGAAAAGATACGAGACAAAAGCAACGGAGATGTCGCAATTGACCAATATTACCGTTATAAGGAAGATGTTGGCATCATGAGGAATATGAATTTGGATGCTTATAGATTCTCAATCTCTTGGTCTAGAATCGTCCCAAAAGGAAAACTTAATGGAGGTATAAACCAAGAAGGAGTCAAATATTACAACAACCTCATCAATGAATTGTTGGCCAATGGTCTACAACCATTCGTAACTTTATTTCATTGGGATCTTCCTCAAACTTTAGAGGACGAGTATGGCGGCTTCTTAAGCCCTCTCATTGTAAATGATTTTCAAGATTATGCGGAACTTTGTTTCAAAGAGTTTGGAGATAGGGTGAAGTATTGGACCACTTTCAATGAGCCATACGCTTTCAGCAATTTTGCCTATACATTAGGTTTCTTTGCACCTGGTCGATGTTCTAAATGGTTTAGTTCAAATTGCACCGGTGGTGATTCAGGGAAAGAGCCTTACATAGTTTCGCATCACCAACTTCTCGCTCATGCCGCAGTTGTCCATGTGTACAAGAAGAAGTATCAGGAATCTCAAAAGGGCGTGATAGGCATAACATTGGCGTCTCATTGGTTCCTTCCACTTTCTGATAAAAAATTGGATCAGAACGCTGTTGAACGAGGACTAGACTTCATGCTTGGATGGTTTATGGAACCACTAACAACGGGAAAATACCCACAAAGCATGCATTGTCTTGTTGGAAAACGATTGCCAAAGTTCTCTAAAAAGCAAGCAAGACTACTTAAAGGGTCATTTGATTTCGTTGGACTAAACTATTATACCTCTATGTATGCTACCAATGCACCACAACCTAAAAATGGTAGACTCAGTTACGACACTGATTCTCATGTCAATTTTACAAGTGAGCGTAATGGTGTTCCAATAGGTCAAAGGGCAGCTTCAAATTGGTTGTATGTTTATCCTAAAGGAATTCAAGAATTGTTACTCTATGTCAAGAAAGTGTACAACAATCCTTTAATTTACATCACCGAAAATGGTATTGATGAGTTCAACGATCCAACGTTATCACTAGAGGAAGCCCTTATGGACACTTATAGAATTGACTATTATCATCGTCATCTCTTTTATATTCGATCTGCAATCAAGAACGGCGTAAATGTAAAAGGATATTTTGCATGGTCATTGCTCGACAATTTTGAATGGACATCGGGTTATACAACGCGCTTTGGCATGAATTTTGTAGATTACAAAAATGGTTTGAAAAGACATCCAAAGTTGTCTGCAAAGTGGTTTAAAAATTTTCTCAAAAGATATTAA 1536 0.3861 MALLKAFLIFTLLNLLTTLPSMEAVSPILDVSSLNRTSFPTSFIFGTGSSSYQYEGAAKEGGRGASIWDTYTHKYPEKIRDKSNGDVAIDQYYRYKEDVGIMRNMNLDAYRFSISWSRIVPKGKLNGGINQEGVKYYNNLINELLANGLQPFVTLFHWDLPQTLEDEYGGFLSPLIVNDFQDYAELCFKEFGDRVKYWTTFNEPYAFSNFAYTLGFFAPGRCSKWFSSNCTGGDSGKEPYIVSHHQLLAHAAVVHVYKKKYQESQKGVIGITLASHWFLPLSDKKLDQNAVERGLDFMLGWFMEPLTTGKYPQSMHCLVGKRLPKFSKKQARLLKGSFDFVGLNYYTSMYATNAPQPKNGRLSYDTDSHVNFTSERNGVPIGQRAASNWLYVYPKGIQELLLYVKKVYNNPLIYITENGIDEFNDPTLSLEEALMDTYRIDYYHRHLFYIRSAIKNGVNVKGYFAWSLLDNFEWTSGYTTRFGMNFVDYKNGLKRHPKLSAKWFKNFLKRY* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3419 511 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 25 510 - -
Mtr2g3419 511 Pfam Glycosyl hydrolase family 1 37 509 IPR001360 GO:0004553|GO:0005975
Mtr2g3419 511 Gene3D Glycosidases 20 510 - -
Mtr2g3419 511 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 43 57 IPR033132 -
Mtr2g3419 511 SUPERFAMILY (Trans)glycosidases 27 509 IPR017853 -
Mtr2g3419 511 PRINTS Glycosyl hydrolase family 1 signature 337 351 IPR001360 GO:0004553|GO:0005975
Mtr2g3419 511 PRINTS Glycosyl hydrolase family 1 signature 413 421 IPR001360 GO:0004553|GO:0005975
Mtr2g3419 511 PRINTS Glycosyl hydrolase family 1 signature 436 447 IPR001360 GO:0004553|GO:0005975
Mtr2g3419 511 PRINTS Glycosyl hydrolase family 1 signature 457 474 IPR001360 GO:0004553|GO:0005975
Mtr2g3419 511 PRINTS Glycosyl hydrolase family 1 signature 481 493 IPR001360 GO:0004553|GO:0005975
Mtr2g3419 511 PANTHER GLYCOSYL HYDROLASE 25 510 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3419 Mtr-Chr2 48262275 48267517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3419 10 508 Glycoside Hydrolase AT5G44640 53.293 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3419 - K01188 gmx:100812431 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3419 2 48262275 48267517 Mtr4g1969 4 33136675 33140841 PCT