Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1955 ATGTTTTCACCATTAACGGCACTGTTACTCTTAGCCATTATCTCCACCGTTACCTCCACCGCTAACTCATGTCTTCCATCAGAACTCAAAGCCCTACAAGCCATAAAAGCCTCACTCCGTGAACCTAACGACGGAATATTCAACTCATGGACCGGAACTGACTGCTGCCACAACTGGTTGGGCGTATCATGCGACGAGAATACTCGTCGCGTAGCCGATATAAACCTCCGTGCCGGAACTCTCTACACCACCTTCGAAAAAGCACGTAAACCTGGCTACATGACCGGTCAAATCTCCCCGGAGATTTGTAAGCTAACTAAACTTTCAAGCATTACAATCACTGATTGGAACGGTATCTCCGGTGAGATCCCCAAGTGCATTTCTTCACTTTCTTTCCTTCGTATCATCGACCTCGCCGGAAACCGTTTCTCCGGTAATATCCCCTCTGATATCGGCAAACTCCGCCATCTCAACCGTCTCAGCATCGCCGACAACGTCATCACCGGTGGAATCCCCAGGTCCTTAACCAACCTAACTAGCTTGACTCATCTTGACATCCGTAATAATAGGATCTCAGGATATATCCCAATGGGCTTTGGCAGGCTTCAGTATTTAGGCCGGGCTTTATTAAGTGGTAATCAGTTACACGGGCCCATCCCCGGCTCAATATCTCGAATCAAACGTCTTTCGGATCTTGATCTATCTCGAAACCAATTATCCGGGCCCATCCCGGAATCATTAGGCTTAATGTCTGTTTTGGGAACCCTAAAGCTTGATACAAACAAGCTTTCGGGGATGATCCCAAAGTCTCTTTTTGGTTCAGGAATAAGTGATTTGAACTTAAGTCATAATTTGTTGGAGGGTAATATACCTGATGCATTTGGGGGTAGGTCTTATTTTACATCATTGGATATTTCCTATAATAATCTCAAGGGTCCTATACCTAAATCTATATCTTCTGCTGCTTACATTGGTTACATGGATTTGAGCCATAATCATTTGTGTGGTCCAATTCCTAAAGTTTTGGATCATCTTGATGCATCTTCGTTTGAGGTCAATGATTGTCTTTGTGGAAAGCCACTTGAAGCTTGCAAAAAGAAGTAA 1104 0.4438 MFSPLTALLLLAIISTVTSTANSCLPSELKALQAIKASLREPNDGIFNSWTGTDCCHNWLGVSCDENTRRVADINLRAGTLYTTFEKARKPGYMTGQISPEICKLTKLSSITITDWNGISGEIPKCISSLSFLRIIDLAGNRFSGNIPSDIGKLRHLNRLSIADNVITGGIPRSLTNLTSLTHLDIRNNRISGYIPMGFGRLQYLGRALLSGNQLHGPIPGSISRIKRLSDLDLSRNQLSGPIPESLGLMSVLGTLKLDTNKLSGMIPKSLFGSGISDLNLSHNLLEGNIPDAFGGRSYFTSLDISYNNLKGPIPKSISSAAYIGYMDLSHNHLCGPIPKVLDHLDASSFEVNDCLCGKPLEACKKK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1955 367 SUPERFAMILY L domain-like 23 339 - -
Mtr4g1955 367 Gene3D Ribonuclease Inhibitor 22 90 IPR032675 -
Mtr4g1955 367 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Mtr4g1955 367 Pfam Leucine rich repeat 133 191 IPR001611 GO:0005515
Mtr4g1955 367 Pfam Leucine rich repeat 277 334 IPR001611 GO:0005515
Mtr4g1955 367 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 1 367 - -
Mtr4g1955 367 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 367 - -
Mtr4g1955 367 Gene3D Ribonuclease Inhibitor 92 367 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1955 Mtr-Chr4 32917829 32919199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1955 117 358 Receptor kinase-like Gene Family AT4G08850 35.918 9.47e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1955 - - lja:Lj3g3v3246330.1 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1955 4 32917829 32919199 Mtr4g1955 4 32917829 32919199 ECH
Mtr2g3406 2 48105057 48106817 Mtr4g1955 4 32917829 32919199 PCT