Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3406 ATGAGTAGCGTTAGGTTTTTCCAAACTATCTCCGTCGCAGCAATACTACTAGCACTCACCGCCACCGTCCATTCATGTCCACCGTCAGATAGGGCGGCGTTATTAGCGTTCAAAGCAGCACTCCACGAACCCCAACTCGGAAAACTCGGTATCTTCACCTCATGGACCGGAGCAGATTGCTGCAACAAATGGTACGGCGTTAGCTGCGACAAAGAATCCCGCCGCGTCGCCGATATCAACCTCCGCGGCGAGTCAGAAGATCCAATCTTCCAAAAAAAACACCACCGTACCGGTTACATGACCGGTTACATCTCACCAGCAATCTGTCACCTCAACCGTCTCTCGAGCTTCACCGTCGCCGATTGGAAAGGTATCTCCGGCGAAATCCCTCGCTGTATATCCTCCCTTCCTTTCCTTCGTATCATTGACCTCATCGGAAACCGCCTCACCGGAACTATCCCCACCGACATCGGAAAACTTCAACGGTTAACCGTTCTTAACATCGCCGACAACGCTATCTCCGGTAACATTCCACGGTCGCTAACAAATCTCAGAAGCCTGATGCATCTTGATATTCGTAACAATCAGATTTCTGGGCCCATACCTAATGACTTCGGCAGGCTTCCAATGTTAAGCCGGGCTTTACTAAGCGGTAATAAATTATCCGGGCCCATACCCGAGTCAATTTCTCGTATTTATCGTTTAGCAGATCTCGATCTATCAAGAAACCAAGTTTCTGGACCCATACCTGAGTCCCTAGGTAAAATGGCGGTTTTGTCCACACTTAATTTGGACATGAACAAAATTTCTGGTCCCATTCCAATAAGTCTTTTTAATTCTGGAATAAGTGATTTAAATTTAAGCCGAAATGGTTTAGAAGGGACTATACCTGATGTGTTTGGTGTGAGATCTTATTTCACGGTTTTGGATTTGAGTTATAATCATCTTAAGGGTCCTATACCTAAATCAATGGGTTCTGCTTCTTATATTGGACATTTGGATTTGAGTTATAATCATTTGTGTGGTAAGATTCCTGTTGGTGATCCTTTTGATCATTTGGAAGCTTCTTCTTTTGTTTACAATGATTGTCTTTGTGGGAAGCCACTTAAACCTTGTGGTGTTAATTAA 1128 0.4468 MSSVRFFQTISVAAILLALTATVHSCPPSDRAALLAFKAALHEPQLGKLGIFTSWTGADCCNKWYGVSCDKESRRVADINLRGESEDPIFQKKHHRTGYMTGYISPAICHLNRLSSFTVADWKGISGEIPRCISSLPFLRIIDLIGNRLTGTIPTDIGKLQRLTVLNIADNAISGNIPRSLTNLRSLMHLDIRNNQISGPIPNDFGRLPMLSRALLSGNKLSGPIPESISRIYRLADLDLSRNQVSGPIPESLGKMAVLSTLNLDMNKISGPIPISLFNSGISDLNLSRNGLEGTIPDVFGVRSYFTVLDLSYNHLKGPIPKSMGSASYIGHLDLSYNHLCGKIPVGDPFDHLEASSFVYNDCLCGKPLKPCGVN* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3406 375 Pfam Leucine rich repeat 162 221 IPR001611 GO:0005515
Mtr2g3406 375 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 7 372 - -
Mtr2g3406 375 Pfam Leucine rich repeat N-terminal domain 28 70 IPR013210 -
Mtr2g3406 375 Gene3D Ribonuclease Inhibitor 97 375 IPR032675 -
Mtr2g3406 375 Gene3D Ribonuclease Inhibitor 23 96 IPR032675 -
Mtr2g3406 375 SUPERFAMILY L domain-like 25 372 - -
Mtr2g3406 375 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 7 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3406 Mtr-Chr2 48105057 48106817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3406 97 374 Receptor kinase-like Gene Family AT4G08850 32.248 6.43e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3406 - - gmx:100804739 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3406 2 48105057 48106817 Mtr4g1955 4 32917829 32919199 PCT