Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1770 ATGGCAAAAACCATAACCACCCTTTTGTTCTTCCTCCTTCTTGGAGGAGTGACCATAACAATGTGTGAAGATGAAGAAAGAGAAGAAGGGTCATCATCAAACTTATTCTTGATGCAAAACTCAAAGAGTGTTGTCAAAACTCATGCAGGAGAATTGAGGTTGTTTAAAAACAATGATGATAGGTTTTTGGATAGGCACATGCACATTGGTTTGCTTAATATGGAACCAAGATCCTTGTTCATTCCTCAGTATCTTGACTCCAATTTGATCATATTTGTCCGTAGAGGGGTAGCAAAGTTGGGATTCATATATGGAGATGAACTAGAGGAAAGGAGAATAAAGACAGGGGATTTGTATGTAATTCCAGCAGGTACTGTATTTTATTTAGTGAATATAGGTGAAGGTCAGAGACTTCATGTCATATGCAGTTTTGACCCCTCTACAAGTTTAGGTGATACTTTTCAGCCTTTCTATATTGGTGGAGGAGATAATCAACAATCTGTGCTTGCTGGATTCGGACCGACAATTCTTGAAACTGCATTTAATGAATCAAGAACAAAGATAGAGAGAATCTTCACCAAGAAACAAGATGGTCCAATTGTGTTCATTGATGATGATTCTCATTCTCCTAGTCTATGGACCAAATTCCTTGAACTGAAGAAGAATGACAAAGTGCAACACCTTAAGACATTGGTACAAAGACAAGAAGAAGAGGAAGAGGAGAAGCAAACAAGTTGGTCATGGAGGAAGCTCATGAAAAATGTATTAGGAAAAGAGAAGAAGAAGATAGAGAATAAAGACAGAGCTGATTCCCCTGACTCTTACAATCTCTATGATAGAAAACCTGATTTCCGAAATGCATATGGTTGGAGCAGTGCATTGGATGGTGGCGATTATTCTCCGCTCAAAATACCTGATATCGGTGTTTTTCACGTCAATCTCACCGCGGGATCAATGATGGCACCACATGTGAATCCAAGTGCAACAGAGTATACCATAGTATTAAGAGGTTATGGAAGAATTCAGATACTATTTCCAAACGGAAGCAATGCAATGGAAGCAGAAATCAAAGTAGGAGACATATTCTACATACCAAGATACTTTCCTTTCTGTCAAATAGCTGCAAGAAATGGACCCTTAGAGTTCTTTGGATTCACAACCTCATCAAAAAAGAGCTATCCACAGTTTCTAGCAGGTGCTGCATCACTTCTTAAGACCATTTTGGGACCTGAACTTGCAGCTGCATTTGGTGTGAGTGAGGGCACTATGAAGGACGTCGTCGATGCTCAACGTGAAGCTGTAATACTTCCTTCAACATGGGCTGCTCCTGGTGGTGGTGGTGGAGGGAAAAAGGATGAAGATGTTCAAACAAAGGGTGTTAAAGGGTTTGTTAATGATGTGATTATGGATGTTTTTGAATAG 1422 0.3966 MAKTITTLLFFLLLGGVTITMCEDEEREEGSSSNLFLMQNSKSVVKTHAGELRLFKNNDDRFLDRHMHIGLLNMEPRSLFIPQYLDSNLIIFVRRGVAKLGFIYGDELEERRIKTGDLYVIPAGTVFYLVNIGEGQRLHVICSFDPSTSLGDTFQPFYIGGGDNQQSVLAGFGPTILETAFNESRTKIERIFTKKQDGPIVFIDDDSHSPSLWTKFLELKKNDKVQHLKTLVQRQEEEEEEKQTSWSWRKLMKNVLGKEKKKIENKDRADSPDSYNLYDRKPDFRNAYGWSSALDGGDYSPLKIPDIGVFHVNLTAGSMMAPHVNPSATEYTIVLRGYGRIQILFPNGSNAMEAEIKVGDIFYIPRYFPFCQIAARNGPLEFFGFTTSSKKSYPQFLAGAASLLKTILGPELAAAFGVSEGTMKDVVDAQREAVILPSTWAAPGGGGGGKKDEDVQTKGVKGFVNDVIMDVFE* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1770 473 CDD cupin_7S_vicilin-like_C 282 433 - -
Mtr4g1770 473 CDD cupin_7S_vicilin-like_N 44 203 - -
Mtr4g1770 473 PANTHER OS03G0336100 PROTEIN-RELATED 1 445 - -
Mtr4g1770 473 SUPERFAMILY RmlC-like cupins 28 433 IPR011051 -
Mtr4g1770 473 SMART Cupin_1_3 275 424 IPR006045 -
Mtr4g1770 473 SMART Cupin_1_3 33 189 IPR006045 -
Mtr4g1770 473 Gene3D Jelly Rolls 16 212 IPR014710 -
Mtr4g1770 473 Gene3D Jelly Rolls 267 439 IPR014710 -
Mtr4g1770 473 Pfam Cupin 275 421 IPR006045 -
Mtr4g1770 473 Pfam Cupin 44 145 IPR006045 -
Mtr4g1770 473 PANTHER OS03G0336100 PROTEIN 1 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1770 Mtr-Chr4 30571073 30573405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1770 32 444 Miscellaneous Gene Families AT2G18540 29.587 1.80e-43 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1770 - - gmx:547942 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1770 4 30571073 30573405 Mtr4g1770 4 30571073 30573405 ECH
Mtr2g3207 2 45919620 45922279 Mtr4g1770 4 30571073 30573405 PCT