Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3207 ATGGGAAAGAAAGCGCCTCTTTTGATCATGCTTCTTATTCTTTGTCATGGTGTGTCCATGATAATGGGAATGTGGGAGGCAGAAGATAGAGAAAATGGACCTTCAACGCCAGACAACAAATTGTTCTTGTTGCAAAACTCAAAGCTTGTGGTGAAGACTGATGCAGGAGAGATGAGAGTGTTGGAGAGTCATGGTGGTAGAATATCTGAAAGACGCTTGCACGTTGGTTTCATTACTATGGAACCAAGCTCACTTTTTGTTCCTCAATATCTTGATTCTACTCTCATCGTATTTGTCCATACAGGAGAAGCAAAGGTGGGATTTGTAAATGAGGATGAATTGGCAGAGAGGGATTTGAAGAAGGGAGATGTGTATCAAATTCCTGCTGGTTCTGCATTCTATTTGTTGAATACTGGGGAGGCTCAAAAGCTTCACATTATTTGTAGCATTGACCCATCCGAGAGTTTGAGAATTGGTATTTTCCAGTCTTTCTATATTGGAGGAGGAGCTCCAGTGTCGGTACTTTCCGGATTCGAGCCTCGAATCCTTGAATCTGCATTTAATGTATCAGGATCAGAGTTGAAGAAATTCTTCACAAGGAAACATGAGGGTCCAATTGTACATGTGGGCCATTCACATGCAAGTGCTTCAAGCATATGGACTAAATTCCTTCAACTAAAAGAGGATGACAAACTAAACCACATGAAGAAAATGATGCAAGATCAAGAAGAAGATGACGTTGAAGAAGAAGTAAAGCAAACAACAAATTGGCCTTGGAGGAAGCTTTTGGAATCTGTATTTGGAGATGAAATAGAAAATATGAAAAAGGACAAGGTTGCACATAAATCCCCTCGCTCTTGCAACCTCTATGACAGAAAACCAGATTTCAAGAACAGTTATGGTTGGAGTGTTTCTCTAGACGGTTCTGATTATTCACCACTTAAAAGTTCCGGCGTTGGAATTTATCACGTCAATCTCAAACCGGGATCCATGATGACACCCCATGTAAATCCAAGGGCAACAGAGTATGGCATAGTCTTAAGAGGTTCTGGTAGAATTCAAATAGTGTTTCCAAATGGAACCAATGCAATGGACACACATATAAAACAAGGAGATGTTTTCTTTATACCAAGATACTTTGCATTTTGCCAAATAGCATCAAGCAATGAACCACTTGATTTCTTTGGATTCACAACTTCAGCTCAGAAGAATAAGCCACAGTTTTTGGTTGGTGCCACGTCACTTATGAAGAGCATGATGGGACCTGAGCTTGCTGCTGCTTTTGGAGTGAGTGAGGATGCAATGCAAAACATCCTTAATGCACAACATGAGTCTGTTATAGTACCTGCCCCAAGGGTTGCACCTGCATTACAAGCTGGACAATAA 1386 0.4084 MGKKAPLLIMLLILCHGVSMIMGMWEAEDRENGPSTPDNKLFLLQNSKLVVKTDAGEMRVLESHGGRISERRLHVGFITMEPSSLFVPQYLDSTLIVFVHTGEAKVGFVNEDELAERDLKKGDVYQIPAGSAFYLLNTGEAQKLHIICSIDPSESLRIGIFQSFYIGGGAPVSVLSGFEPRILESAFNVSGSELKKFFTRKHEGPIVHVGHSHASASSIWTKFLQLKEDDKLNHMKKMMQDQEEDDVEEEVKQTTNWPWRKLLESVFGDEIENMKKDKVAHKSPRSCNLYDRKPDFKNSYGWSVSLDGSDYSPLKSSGVGIYHVNLKPGSMMTPHVNPRATEYGIVLRGSGRIQIVFPNGTNAMDTHIKQGDVFFIPRYFAFCQIASSNEPLDFFGFTTSAQKNKPQFLVGATSLMKSMMGPELAAAFGVSEDAMQNILNAQHESVIVPAPRVAPALQAGQ* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3207 461 PANTHER OS03G0336100 PROTEIN 1 455 - -
Mtr2g3207 461 CDD cupin_7S_vicilin-like_C 294 445 - -
Mtr2g3207 461 CDD cupin_7S_vicilin-like_N 50 209 - -
Mtr2g3207 461 PANTHER OS03G0336100 PROTEIN-RELATED 1 455 - -
Mtr2g3207 461 Pfam Cupin 288 434 IPR006045 -
Mtr2g3207 461 Pfam Cupin 48 193 IPR006045 -
Mtr2g3207 461 Gene3D Jelly Rolls 35 222 IPR014710 -
Mtr2g3207 461 SMART Cupin_1_3 287 436 IPR006045 -
Mtr2g3207 461 SMART Cupin_1_3 41 195 IPR006045 -
Mtr2g3207 461 SUPERFAMILY RmlC-like cupins 49 445 IPR011051 -
Mtr2g3207 461 Gene3D Jelly Rolls 279 451 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3207 Mtr-Chr2 45919620 45922279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3207 46 454 Miscellaneous Gene Families AT2G18540 30.118 4.21e-47 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3207 - - mtr:MTR_2g093410 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3207 2 45919620 45922279 Mtr4g1770 4 30571073 30573405 PCT