Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1740 ATGCTATACCATAATAAACGACTCGTCGTTTTCCTCTTCCTCACCACTCTCCTTCTCATTTCTTCATTCTCTTTCACTCTTTCAGAAAAAACCCAAAACAACGACGACGACGATGAAGATCTCAGCTTCCTCGAAGAACCAGAAGACACCACCACCACCCACCACGACCACGCTGATTTCCCAGATCCCGATAACTTCGACGACGACGACGAAGGCGATGACGGCGACGAATTCGGCGATTTCTCCGGTTACGATCCTCACTCCGATGAAGACTTCAAGGAACCAGAAGTGGATGAGAAAGATGTTGTCGTTTTGATTGAGCGAAACTTCACTACCGTAATTGAAAACAACCAATTCGTGATGGTTGAATTTTATGCTCCGTGGTGTGGACATTGTCAAGCTTTGGCGCCAGAGTATGCTGCGGCGGCGACGGAATTGAAGAAAGATGGTGTTGTTTTGGCTAAGGTGGATGCTTCGGTGGAAAATGAATTGGCTTATGAGTATAATGTTCAGGGTTTTCCTACTGTGTACTTTTTCATCGATGGAGTTCATAAGCCTTACAATGGCCAAAGAACTAAAGATGCTATAGTGACATGGATCAAGAAGAAGACAGGACCTGGTGTATACAACATAACTACATTGGATGATGCTGAACGCATATTGACTTCTGAAACTAAAGTTGTTTTGGGATTCCTTGACTCCTTAGTTGGTGCTGAAAGTGACGAGCTAGCTGCAGCATCAAAACTTGAGGATGGTGTCAATTTTTACCAAACCGTGATTCCTAATGTGGCTAAGCTTTTCCATATTGACCCAGATGTCAAGCGCCCTGCTTTGGTCTTGCTCAAGAAAGAGGAGGAGAAACTTAACCATTTTGATGGCCAATTTGTAAAAGCAGAAATAGCCAACTTTGTATCATCCAACAAGCTTCCGTTGGTCAACATTTTTACAAGGGAAAGTGCTCCCGTGATTTTTGAAAGTCCAATCAAGAAACAGTTGTTGCTGTTTGTGACTTCAAATGATACAGCGAAGTTCATCACAGTATTTCAAGAAGCAGCAAAGCTTTTCAAGGGGAAGCTGATCTTTGTTCATGTGGAAATGGATAATGAAGATGTTGGAAAGCCTGTTGCAGATTATTTTGGTCTTTCTGGAAATACTCCCAAAGTACTTGCATTCACAGGAAATGAGGATGGCAGAAAATTTTTGCTTGATGGAGAAGTGACCATTGACAATATTAAGGCATTTGGGGAAGATTTCCTTGCAGACAAGCTAAAACCTTTTATCAAGTCGGATCCAATTCCTGAAAGTAATGATGGTGATGTGAAAATAGTTGTTGGCAATAACTTCGACGAAATTGTCTTGGATGAGTCGAAGGATGTTCTACTTGAGGTTTATGCTCCTTGGTGTGGCCATTGCCAAGCCTTGGAACCAACATTCAACAAGCTCGCAAAACATCTTCATAGCATTGAATCTATTGTAGTAGCCAAGATGGATGGAACAACAAATGAGCATCCTAGGGCAAAGTCTGACGGGTTCCCCACTCTTCTCTTCTACCCTGCAGGAAAAAAGAGTTCTGACCCTATTACTGTTGATGTGGATCGTACAGTCGTGGCTTTTTACAAGTTCCTCAAGAAACACGCATCAATTCCATTCCAACTCCAGAAACCAACCACAACTTCTAAAACCAATGATAGTGGGAGTTCTGACATCAAGGAAAGTCAGAGTAGCATCACAGATGCGAAAGATGAGTTATGA 1752 0.4241 MLYHNKRLVVFLFLTTLLLISSFSFTLSEKTQNNDDDDEDLSFLEEPEDTTTTHHDHADFPDPDNFDDDDEGDDGDEFGDFSGYDPHSDEDFKEPEVDEKDVVVLIERNFTTVIENNQFVMVEFYAPWCGHCQALAPEYAAAATELKKDGVVLAKVDASVENELAYEYNVQGFPTVYFFIDGVHKPYNGQRTKDAIVTWIKKKTGPGVYNITTLDDAERILTSETKVVLGFLDSLVGAESDELAAASKLEDGVNFYQTVIPNVAKLFHIDPDVKRPALVLLKKEEEKLNHFDGQFVKAEIANFVSSNKLPLVNIFTRESAPVIFESPIKKQLLLFVTSNDTAKFITVFQEAAKLFKGKLIFVHVEMDNEDVGKPVADYFGLSGNTPKVLAFTGNEDGRKFLLDGEVTIDNIKAFGEDFLADKLKPFIKSDPIPESNDGDVKIVVGNNFDEIVLDESKDVLLEVYAPWCGHCQALEPTFNKLAKHLHSIESIVVAKMDGTTNEHPRAKSDGFPTLLFYPAGKKSSDPITVDVDRTVVAFYKFLKKHASIPFQLQKPTTTSKTNDSGSSDIKESQSSITDAKDEL* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1740 583 TIGRFAM pdi_dom: protein disulfide-isomerase domain 106 203 IPR005788 GO:0003756
Mtr4g1740 583 ProSiteProfiles Thioredoxin domain profile. 417 547 IPR013766 -
Mtr4g1740 583 Gene3D Glutaredoxin 205 308 - -
Mtr4g1740 583 SUPERFAMILY Thioredoxin-like 307 437 IPR036249 -
Mtr4g1740 583 CDD PDI_b_family 208 307 - -
Mtr4g1740 583 MobiDBLite consensus disorder prediction 63 79 - -
Mtr4g1740 583 PRINTS Thioredoxin family signature 120 128 - -
Mtr4g1740 583 PRINTS Thioredoxin family signature 128 137 - -
Mtr4g1740 583 PRINTS Thioredoxin family signature 169 180 - -
Mtr4g1740 583 ProSiteProfiles Thioredoxin domain profile. 83 205 IPR013766 -
Mtr4g1740 583 PANTHER PROTEIN DISULFIDE-ISOMERASE 4 575 - -
Mtr4g1740 583 SUPERFAMILY Thioredoxin-like 208 319 IPR036249 -
Mtr4g1740 583 MobiDBLite consensus disorder prediction 29 96 - -
Mtr4g1740 583 MobiDBLite consensus disorder prediction 47 62 - -
Mtr4g1740 583 TIGRFAM ER_PDI_fam: protein disulfide isomerase 100 582 IPR005792 GO:0003756
Mtr4g1740 583 MobiDBLite consensus disorder prediction 80 96 - -
Mtr4g1740 583 Gene3D Glutaredoxin 434 548 - -
Mtr4g1740 583 SUPERFAMILY Thioredoxin-like 95 205 IPR036249 -
Mtr4g1740 583 Gene3D Glutaredoxin 309 433 - -
Mtr4g1740 583 ProSitePatterns Thioredoxin family active site. 121 139 IPR017937 -
Mtr4g1740 583 Gene3D Glutaredoxin 89 204 - -
Mtr4g1740 583 PANTHER PROTEIN DISULFIDE ISOMERASE 4 575 - -
Mtr4g1740 583 CDD PDI_b'_family 319 419 - -
Mtr4g1740 583 CDD PDI_a_family 103 200 - -
Mtr4g1740 583 MobiDBLite consensus disorder prediction 554 583 - -
Mtr4g1740 583 MobiDBLite consensus disorder prediction 554 573 - -
Mtr4g1740 583 ProSitePatterns Thioredoxin family active site. 460 478 IPR017937 -
Mtr4g1740 583 SUPERFAMILY Thioredoxin-like 435 546 IPR036249 -
Mtr4g1740 583 Pfam Thioredoxin-like domain 243 414 - -
Mtr4g1740 583 Pfam Thioredoxin 440 525 IPR013766 -
Mtr4g1740 583 Pfam Thioredoxin 102 202 IPR013766 -
Mtr4g1740 583 CDD PDI_a_PDI_a'_C 440 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1740 Mtr-Chr4 30085858 30091109 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1740 K09580 - gmx:100790223 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1740 4 30085858 30091109 Mtr4g1740 4 30085858 30091109 ECH
Mtr2g3237 2 46273892 46278004 Mtr4g1740 4 30085858 30091109 PCT