Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3237 ATGAGAATTCTCATTCTTCTTTCCCTCACTACCCTTCTATTCTTCTCCTCCTTCACTCACATTCTATGCGAACAAGATATCGATGACGAAGATCTCAGTTTCCTCGACGAACCAGAAGCTGGTGAAACCACCACCTCACACCACCACCATCACGACGACGATGCCGATCTCGAAGAAGATTTCTCAGGCTACGAAGATTCAGAAATTCATCAAGCGCCTGAATTCGACGAAAAAGACGTCGTCGTTTTGAATGATACAAACTTCACTGACGTAGTCAACAAAAACCGATTCGTTTTAGTCGAATTCTACGCTCCATGGTGTGGTCATTGTCAAGCATTAGCACCGGAATACGCCGCCGCAGCGACCGAATTGAAGGGTGATAATGTCATCTTAGCTAAACTTGATGCGACTGAAGATAATGAAGTTGCTCAGAAATTTGATGTTCAGGGTTTTCCTACTATTCTTTTCTTCATTGATGGTGTTCATAAGAGTTACACTGGTCAAAGAACAAAAGAAGCTATTGTGACATGGATTAAGAAGAAGACTGGACCTGGTATACATAACATTACTTCATTGGATGAGGCTAAAACAATATTGTCTTCTGAAACCAAAGTTGTTTTGGGTTTTCTCAATTCTTTAGTTGGTCCTGAGAGTGAGGAGCTAGCTGCGGCTTCACGTCTTGAGGATGATGTGAATTTTTACCAGACTGTGGATCCTGAAGTTGCAAAGCTTTTCAATATTGACACTAATGCCAAACGCCCCGCATTGATCCTTGTCAAGAAAGAGGAGGAACAGCTAAACCATTTTGATGGAAAATTCGACAAGTCTGCAATAGTAGACTTTGTCTCCTCCAACAAGATCCCTTTGGTAACAGTTTTTACAAGAGAAAATGCTCCAACTATCTTTGAAAATCCAATCAAGAAACAGGTGTTGCTGTTTGTGACTTCAAATGATTCAGAGAAATTGCTCCCAGTATTTCAGGAAGCATCAAAGTCTTTCAAGGGAAAGTTGATCTTTGTGCTTGTGGAAACTGATAACGAAGATGTTGGAAAGCCTGTTTCAGATTACTTCGGTATTAGTGGGACTGCTCCACAAGTACTTGCATACACCGGAAATGATGATGGAAGAAAATTTGTGTTTGAAGGAGAAGTGACTGGTGACAAAATTAAGGCATTTGGGGAAGATTTCCTTGAAGACAAGCTAAAACCTTTTTTCAAGTCAGATCCAATTCCTGAAAGTAATGATGGTGACGTGAAAATAGTTGTTGGGAACAATTTTGATGAAATTGTCTTGGATGAGTCAAAGGACGTTCTCCTTGAGATATATGCTCCCTGGTGTGGCCATTGCCAACATTTGGAGCCGATATACAACAAGCTTGCAAAACACCTTCGCAGTATTGACTCTCTTGTAATAGCCAAGATGGATGGAACACAAAATGAGCATCCCAGGGCAAAGTCTGATGGATTCCCCACTCTTCTCTTCTTCCCAGCAGGAAACAAAAGTTTTGATCCTATTACTGTTGAGACAGATCGTACTGTGGTAGCCTTTTACAAGTTCCTCAAGCAGCATGCATCAATCCCATTCAAGCTCCAGAAACCAGCCTCAACTCCTAAACCAGAGAGCACTGATGCCAAGGAGAGTTCTGATGCCAAAGAGAACCAAAGTAGCAATAGCGATGTCAAGGATGAGCTATGA 1695 0.4159 MRILILLSLTTLLFFSSFTHILCEQDIDDEDLSFLDEPEAGETTTSHHHHHDDDADLEEDFSGYEDSEIHQAPEFDEKDVVVLNDTNFTDVVNKNRFVLVEFYAPWCGHCQALAPEYAAAATELKGDNVILAKLDATEDNEVAQKFDVQGFPTILFFIDGVHKSYTGQRTKEAIVTWIKKKTGPGIHNITSLDEAKTILSSETKVVLGFLNSLVGPESEELAAASRLEDDVNFYQTVDPEVAKLFNIDTNAKRPALILVKKEEEQLNHFDGKFDKSAIVDFVSSNKIPLVTVFTRENAPTIFENPIKKQVLLFVTSNDSEKLLPVFQEASKSFKGKLIFVLVETDNEDVGKPVSDYFGISGTAPQVLAYTGNDDGRKFVFEGEVTGDKIKAFGEDFLEDKLKPFFKSDPIPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQHLEPIYNKLAKHLRSIDSLVIAKMDGTQNEHPRAKSDGFPTLLFFPAGNKSFDPITVETDRTVVAFYKFLKQHASIPFKLQKPASTPKPESTDAKESSDAKENQSSNSDVKDEL* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3237 564 SUPERFAMILY Thioredoxin-like 189 297 IPR036249 -
Mtr2g3237 564 Pfam Thioredoxin-like domain 221 392 - -
Mtr2g3237 564 ProSiteProfiles Thioredoxin domain profile. 396 525 IPR013766 -
Mtr2g3237 564 PANTHER PROTEIN DISULFIDE-ISOMERASE 5 544 - -
Mtr2g3237 564 TIGRFAM ER_PDI_fam: protein disulfide isomerase 78 564 IPR005792 GO:0003756
Mtr2g3237 564 Gene3D Glutaredoxin 74 183 - -
Mtr2g3237 564 ProSitePatterns Thioredoxin family active site. 99 117 IPR017937 -
Mtr2g3237 564 MobiDBLite consensus disorder prediction 530 564 - -
Mtr2g3237 564 MobiDBLite consensus disorder prediction 542 564 - -
Mtr2g3237 564 Pfam Thioredoxin 80 180 IPR013766 -
Mtr2g3237 564 Pfam Thioredoxin 418 505 IPR013766 -
Mtr2g3237 564 SUPERFAMILY Thioredoxin-like 285 415 IPR036249 -
Mtr2g3237 564 Gene3D Glutaredoxin 184 286 - -
Mtr2g3237 564 CDD PDI_b'_family 297 397 - -
Mtr2g3237 564 Gene3D Glutaredoxin 287 411 - -
Mtr2g3237 564 CDD PDI_a_family 81 178 - -
Mtr2g3237 564 Gene3D Glutaredoxin 412 526 - -
Mtr2g3237 564 PANTHER PROTEIN DISULFIDE ISOMERASE 5 544 - -
Mtr2g3237 564 PRINTS Thioredoxin family signature 98 106 - -
Mtr2g3237 564 PRINTS Thioredoxin family signature 106 115 - -
Mtr2g3237 564 PRINTS Thioredoxin family signature 147 158 - -
Mtr2g3237 564 CDD PDI_a_PDI_a'_C 418 520 - -
Mtr2g3237 564 SUPERFAMILY Thioredoxin-like 73 183 IPR036249 -
Mtr2g3237 564 ProSitePatterns Thioredoxin family active site. 438 456 IPR017937 -
Mtr2g3237 564 ProSiteProfiles Thioredoxin domain profile. 66 183 IPR013766 -
Mtr2g3237 564 SUPERFAMILY Thioredoxin-like 414 525 IPR036249 -
Mtr2g3237 564 TIGRFAM pdi_dom: protein disulfide-isomerase domain 83 181 IPR005788 GO:0003756
Mtr2g3237 564 CDD PDI_b_family 186 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3237 Mtr-Chr2 46273892 46278004 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3237 K09580 - gmx:100804924 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3237 2 46273892 46278004 Mtr4g1740 4 30085858 30091109 PCT