Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1687 ATGGCGAAGAAGAAAAATAAGGGTGGAAATGGTGGGAATAATGCTGAAAACAACAACAATGGTGAAAACAAAGAAGAAAACAACAACAACAATGAAGGAAACAAGGAAGAAGAAAACAACAACAACAACAATGGAGGAGATAAGAACAACAATGGAGGAGAGAAGAAAGAAGAAAACAACAACAAAGGCAAAAACAACGCAACGGTTTTGAAAGTCTATATGCATTGCGAAGGTTGCGCTAACAAAGTCACCAAACACCTTAACGGCATCAAAGGTGTTGATACGGTGAAAGCAGAGAGTGAAACCGGAAAAGTAACCGTCACCGGAAATGTGGACCCCACAAAACTGAGAGACAATCTTGCTGAGAAGATTAAGAAGAAAGTTGAACTCATTTCACCAATTCCCAAGAAGGATAACAAGAAGGAAAATGAACCAAACAAAAAATCTGATGAGAAGAAAAATGAAGACAAAAAAGAGTCAATTACCACTTCTGTTTTGAAATTGGTACTACACTGTCAAGGATGTATTGATAAGATTGGGAAAATTGTTATGAAAACTAAAGGAGTGCTTGAAATGAAAGTTGATAAAGAGAAAGATAATGTGACTGTGAAGGGTACAATGGATGTGAAAAAGCTAGTAGAGAATTTATCACAGAAGCTAAAGAGAAAGGTTGAGGTAGTTCAACCAAAGAAAGACAAAGAAGGTGGTGGTGGTGAGAAAGAAGGAAATGAAGGTGGTGGTGGGGGTAAGAAAAAGAACAAGGGGGGTGGAGATAGTAATAACAATGAAGGAGGAGGTGAAGTTCAGATAATGGAGTATATGGTTCAACAACCCTTTGGTTTTGGTTATGGAAATGTAAATGTTGAAGGGTATAATGCTGCACAAGTTTACCAAGAGATGTTAAATATTCATATGCAAACACAACCACCACAAATGTTTAGTGATGAGAATCCAAATGCTTGCATTGTCATGTGA 975 0.3733 MAKKKNKGGNGGNNAENNNNGENKEENNNNNEGNKEEENNNNNNGGDKNNNGGEKKEENNNKGKNNATVLKVYMHCEGCANKVTKHLNGIKGVDTVKAESETGKVTVTGNVDPTKLRDNLAEKIKKKVELISPIPKKDNKKENEPNKKSDEKKNEDKKESITTSVLKLVLHCQGCIDKIGKIVMKTKGVLEMKVDKEKDNVTVKGTMDVKKLVENLSQKLKRKVEVVQPKKDKEGGGGEKEGNEGGGGGKKKNKGGGDSNNNEGGGEVQIMEYMVQQPFGFGYGNVNVEGYNAAQVYQEMLNIHMQTQPPQMFSDENPNACIVM* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1687 324 MobiDBLite consensus disorder prediction 223 265 - -
Mtr4g1687 324 MobiDBLite consensus disorder prediction 34 49 - -
Mtr4g1687 324 Pfam Heavy-metal-associated domain 71 127 IPR006121 GO:0046872
Mtr4g1687 324 Pfam Heavy-metal-associated domain 170 219 IPR006121 GO:0046872
Mtr4g1687 324 MobiDBLite consensus disorder prediction 10 27 - -
Mtr4g1687 324 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 48 324 - -
Mtr4g1687 324 SUPERFAMILY HMA, heavy metal-associated domain 164 219 IPR036163 GO:0046872
Mtr4g1687 324 CDD HMA 170 214 IPR006121 GO:0046872
Mtr4g1687 324 Gene3D - 64 138 - -
Mtr4g1687 324 Gene3D - 161 234 - -
Mtr4g1687 324 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 48 324 IPR044594 GO:0046872
Mtr4g1687 324 MobiDBLite consensus disorder prediction 131 160 - -
Mtr4g1687 324 MobiDBLite consensus disorder prediction 1 64 - -
Mtr4g1687 324 CDD HMA 74 129 IPR006121 GO:0046872
Mtr4g1687 324 ProSiteProfiles Heavy-metal-associated domain profile. 74 122 IPR006121 GO:0046872
Mtr4g1687 324 SUPERFAMILY HMA, heavy metal-associated domain 68 130 IPR036163 GO:0046872
Mtr4g1687 324 MobiDBLite consensus disorder prediction 223 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1687 Mtr-Chr4 29362534 29364379 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1687 - - mtr:MTR_4g057765 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1687 4 29362534 29364379 Mtr4g1687 4 29362534 29364379 ECH
Mtr2g3281 2 46892582 46894224 Mtr4g1687 4 29362534 29364379 PCT