LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr2g3281	ATGTCGCAGAAGAAAAAGAACAACGCCCAAAACGACACCAAGCAAAACAATGAAACTCAGAAGAAGCACAACAACAACAACAACGAGAATAAGAATGAAACGCAGAAGAAGCAGAACAACAACACCAACAACATCATCAATAACAACAACAATAAGAAGAACGAGAATAATAAAAATAATGAAACGAAACCAACTAACGTCATTTTGAAGGTCGACATGCATTGTGAAGGTTGTTCTTCCAAAATCGTCAAATTCATCCAAGGTTTCGAAGGCTTCGAGAAACTTGATATTGGTAATGGCGGAAAGTTAACCGTCACCGGAACCGTCGATGCTGGAAAACTCAGAGATAACCTTACTATTAAAACGAAGAAGAAAGTTGACTTCATTTCTCCGGTTCCAAAAAAAGACAAGGAAAACAAATCCGAAAATGAGAACAAAAACAAACAGGAAGACAAAAAACCTAAAGAGCCTCCTGTGACGACGGCGGTTTTGAAGTTGGAGCTGCATTGTCAAGGTTGTACTGAAAAGATTCGCAAAACTGTTTTGAAAACTAAAGGTGTTCAGCATGTGACTATAGATAAGGAGAAAGAGATAGTGACTGTGAAGGGAACAATGGATATGAAAGTTTTAGTGGAGAAGTTAAAGAAGAGGTTTAAGAGGAAGGTTGAGGTGGTCCCTGCTAAGAAGGAAAAGGAGAAGGAGAAGGAGAAGGAGAATGAGAAAGTGAAAGAGAAAGGAGAGAATGATGGCGGTAACAAGAAGAATAATCAGAAAGGTGGTGAAGGTGGTGGAGGAGGAGGAAAGAAAAAGGGTGAGGGAAATGGTGGTGAAAACATTGCAAAAAAGGAGGTTTTGACACAACCTAGTTACGGTTATGGTAATGGTTATGGATATGGTGGTTTTTTTGGATTTGATGAAGGTTATAACTATGGACAAGTTCAAATGATGCATATGCAGGAAGCACCACAAATGTTTAGTGATGAAAATCCTAATGCTTGTTCTGTTATGTGA	1011	0.3877	MSQKKKNNAQNDTKQNNETQKKHNNNNNENKNETQKKQNNNTNNIINNNNNKKNENNKNNETKPTNVILKVDMHCEGCSSKIVKFIQGFEGFEKLDIGNGGKLTVTGTVDAGKLRDNLTIKTKKKVDFISPVPKKDKENKSENENKNKQEDKKPKEPPVTTAVLKLELHCQGCTEKIRKTVLKTKGVQHVTIDKEKEIVTVKGTMDMKVLVEKLKKRFKRKVEVVPAKKEKEKEKEKENEKVKEKGENDGGNKKNNQKGGEGGGGGGKKKGEGNGGENIAKKEVLTQPSYGYGNGYGYGGFFGFDEGYNYGQVQMMHMQEAPQMFSDENPNACSVM*	337

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr2g3281	336	MobiDBLite	consensus disorder prediction	1	62	-	-
	Mtr2g3281	336	MobiDBLite	consensus disorder prediction	1	15	-	-
	Mtr2g3281	336	MobiDBLite	consensus disorder prediction	129	158	-	-
	Mtr2g3281	336	MobiDBLite	consensus disorder prediction	31	62	-	-
	Mtr2g3281	336	Coils	Coil	16	36	-	-
	Mtr2g3281	336	MobiDBLite	consensus disorder prediction	16	30	-	-
	Mtr2g3281	336	Gene3D	-	63	136	-	-
	Mtr2g3281	336	MobiDBLite	consensus disorder prediction	226	254	-	-
	Mtr2g3281	336	SUPERFAMILY	HMA, heavy metal-associated domain	159	216	IPR036163	GO:0046872
	Mtr2g3281	336	Coils	Coil	225	248	-	-
	Mtr2g3281	336	CDD	HMA	168	216	IPR006121	GO:0046872
	Mtr2g3281	336	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6	48	336	IPR044594	GO:0046872
	Mtr2g3281	336	SUPERFAMILY	HMA, heavy metal-associated domain	66	118	IPR036163	GO:0046872
	Mtr2g3281	336	Pfam	Heavy-metal-associated domain	70	115	IPR006121	GO:0046872
	Mtr2g3281	336	Pfam	Heavy-metal-associated domain	167	217	IPR006121	GO:0046872
	Mtr2g3281	336	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3	48	336	-	-
	Mtr2g3281	336	MobiDBLite	consensus disorder prediction	226	280	-	-
	Mtr2g3281	336	Gene3D	-	160	226	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr2g3281	Mtr-Chr2	46892582	46894224	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr2g3281	-		-	mtr:MTR_2g095480	406.757

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr2g3281	2	46892582	46894224	Mtr2g3281	2	46892582	46894224	ECH
	Mtr2g3281	2	46892582	46894224	Mtr4g1687	4	29362534	29364379	PCT