Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1670 ATGCCATTATCATCACAATCCTTTAATTTCTTCCATATGGTTCCTATCTTCACTTTTGTTGTACTTTCACTCACAATATTTGGTTCTAATGCTCAGGGTCCACCTTCACCTGGCTACTATCCTAGTTCCAAAATTAGTCCTATATCCTTTAGTCAAGGCTTTAGAAACCTTTGGGGACCTCAACATCAAAGATTGGACCAAAGCTCTTTAACAATATGGCTTGACTCTAACTCAGGTAGTGGATTCAAGTCACTTCATTCTTATAAATCCGGATACTTTGGTGCTGCAATTAAGCTTCATCCTGGCTATACTGCTGGAGTTATTACTTCTCTCTATCTTTCAAATAACCAAGACCATCCAGGAAACCATGATGAAATTGACATTGAGTTTCTTGGAACTACACCTGGTAAGCCATATGTGTTACAAACAAATGTATATATGAGAGGAAGTGGAGATGGGAACATTATAGGAAGAGAGATGCAATTTCATCTTTGGTTTGATCCAACTCAAGATTTTCACAACTATGCTATTCTATGGAAACCCAGTGAGATAATATTTTTAGTAGATGATGTGCCCATAAGAAGGTATCCTAGGAAAAGTGATGCCACCTACCCTACAAGACCAATGTATCTCTATGGATCAATTTGGGATGCATCTTCTTGGGCAACAGAAGATGGAAAATATAAAGCTGATTATAAATACCAACCCTTTGTTGGAAGGTACACTAACTTCAAATTACAAGGTTGTACCATTCAAAGTCCTGCCTCATGCCAATCACCATCTGTCTCTCCATCTGGATATGGTAGTCTTAGCCCTCAACAATATATGGCCATGCAATGGGTCCAAAGCAAGTACATGGTGTATAATTATTGTCATGACCCTAGAAGAAACCACAATCTTATCCCTGAGTGTTAA 915 0.3836 MPLSSQSFNFFHMVPIFTFVVLSLTIFGSNAQGPPSPGYYPSSKISPISFSQGFRNLWGPQHQRLDQSSLTIWLDSNSGSGFKSLHSYKSGYFGAAIKLHPGYTAGVITSLYLSNNQDHPGNHDEIDIEFLGTTPGKPYVLQTNVYMRGSGDGNIIGREMQFHLWFDPTQDFHNYAILWKPSEIIFLVDDVPIRRYPRKSDATYPTRPMYLYGSIWDASSWATEDGKYKADYKYQPFVGRYTNFKLQGCTIQSPASCQSPSVSPSGYGSLSPQQYMAMQWVQSKYMVYNYCHDPRRNHNLIPEC* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1670 304 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 29 241 IPR000757 GO:0004553|GO:0005975
Mtr4g1670 304 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 269 304 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Mtr4g1670 304 Gene3D - 30 304 - -
Mtr4g1670 304 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 16 304 - -
Mtr4g1670 304 Pfam Glycosyl hydrolases family 16 52 233 IPR000757 GO:0004553|GO:0005975
Mtr4g1670 304 SUPERFAMILY Concanavalin A-like lectins/glucanases 50 304 IPR013320 -
Mtr4g1670 304 PIRSF EndGlu_transf 11 304 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mtr4g1670 304 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 16 304 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1670 Mtr-Chr4 29178472 29181376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1670 17 304 Glycoside Hydrolase AT3G44990 63.574 2.70e-139 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1670 K08235 - gmx:100781528 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1670 4 29178472 29181376 Mtr4g1670 4 29178472 29181376 ECH
Mtr2g3289 2 46975749 46978132 Mtr4g1670 4 29178472 29181376 PCT