Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3289 ATGAGCAGATCACCAACCCTGCCTCTAATTTTCTTGCCATCATCACTCTGTATGGCTCCTCTCTTCTCTCTTTTCTTCTCATTCTTGATGTGTAGTCGTAATGCTGGGGGTGCACCATCACCAGGGTACTACCCTAGTTCCAAAGTAAGCACTATTAGCTTTGATCAAGAATTTAGAAATCTATGGGGAGCTCAGCATCAGAAACTAGACCATGGATCATTATCAATCTGGCTTGACTCTACCACAGGGAGTGGATTCAAGTCATATCACTCTTATAAATCTGGATATTTTGGTACTGCGGTTAAGCTTCAACCAGGTTATACTGCAGGAGTCAATACAAATTTATATCTTTCAAACATAGAAGATCACAAAGGAACCCATGATGAAATAGACATTGAGTTCCTTGGTACTACACAAGATAAGCCATATGTGTTGCAGACAAATGTGTACATTAGAGGAAGTGGAGATGGGAAGAATATAGGAAGAGAGATGAGATTTCATCTTTGGTTCGACCCAACACAAGATTTTCACAACTATGCCATTCTATGGAAACCTAGTGAGATCATATTTTTGGTGGATGATGTTCCAATAAGGAGGTATCCTAGGAAGAGTGATGCAACATTCCCTTCAAGACCAATGTATGTGTATGGATCAATCTGGGATGCATCTGCATGGGCTACAGAGAATGGAAAATACAAAGCAAATTATACTTACCAACCCTTCATTGGAAGATACCAAAACTTCAAACTACAAGGTTGTACCACTGATTCCACCTCCTCATGCCGGCCACCTTCTGTCTCACCACCCGGCTATGGCGGCAAGCTGAGCCGTCAGCAAAATGTTGCAATGCAATGGGTCCAAAAAAATTACTTGGTCTATGATTATTGTCATGATCCTAAGAGAGACCATACACTTACTCCAGAATGCTAA 930 0.4118 MSRSPTLPLIFLPSSLCMAPLFSLFFSFLMCSRNAGGAPSPGYYPSSKVSTISFDQEFRNLWGAQHQKLDHGSLSIWLDSTTGSGFKSYHSYKSGYFGTAVKLQPGYTAGVNTNLYLSNIEDHKGTHDEIDIEFLGTTQDKPYVLQTNVYIRGSGDGKNIGREMRFHLWFDPTQDFHNYAILWKPSEIIFLVDDVPIRRYPRKSDATFPSRPMYVYGSIWDASAWATENGKYKANYTYQPFIGRYQNFKLQGCTTDSTSSCRPPSVSPPGYGGKLSRQQNVAMQWVQKNYLVYDYCHDPKRDHTLTPEC* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3289 309 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 274 309 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Mtr2g3289 309 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 21 309 - -
Mtr2g3289 309 PIRSF EndGlu_transf 17 309 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mtr2g3289 309 SUPERFAMILY Concanavalin A-like lectins/glucanases 53 309 IPR013320 -
Mtr2g3289 309 Gene3D - 34 309 - -
Mtr2g3289 309 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 5 245 IPR000757 GO:0004553|GO:0005975
Mtr2g3289 309 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 21 309 IPR044791 GO:0004553
Mtr2g3289 309 Pfam Glycosyl hydrolases family 16 55 237 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3289 Mtr-Chr2 46975749 46978132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3289 16 309 Glycoside Hydrolase AT3G44990 63.946 1.49e-137 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3289 K08235 - gmx:100776165 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3289 2 46975749 46978132 Mtr4g1670 4 29178472 29181376 PCT