Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1609 ATGAATTCCCTTACTACACCGTCTTCCAATTCCCTTACCTATCTGAACCGGGTTCGCCCCTCGTTAAACCGGATCGGTTCAGCTCCAACGAGAATAAGCGTTAAATGCGGATACGGTTTTGAATTCTCCACCGGTTCAAACCGAGCCGATTGGCAAAGCTCATGCGCTATTTTATCAAGCAAGGTAAATTCACAGCGAGATGAATCACCGGTCACCGGAAACGACCATGTCTCCGCCGTCAACGGCCACAACAACGCCGTAACTGATCTTCAGCTCGTCCCAATCGGAAACAATAAATCACTTCAACCAAAGCCACTTAGCATCACCGACCTATCTCCGGCACCGATGCACGGCTCAACTCTCCGTGTCGCGTACCAAGGAGTTCCCGGTGCATACTCCGAAGCCGCTGCCGGAAAAGCTTATCCGAACAGCGAAGCCATGCCGTGTGATCAATTCGAGGTAGCTTTTCAATCGGTAGAACTCTGGATTGCTGATCGTGCAGTCCTACCGGTTGAAAACTCCCTTGGAGGATCTATCCACCGAAACTACGACCTCCTCCTCCGTCACCGCCTCCATATCGTCGGAGAAGTTCAGCTCCCCGTCCACCACTGCCTCCTCGCACTTCCAGGAGTCCGAAAAGAATATTTAACACGCGTGATTTCGCATCCACAAGCATTAGCTCAATGCGAAAACACGTTAACAAAGCTCGGCCTCAACGTAGCGCGTGAGGCCGTTGACGATACAGCTGGTGCCGCGGAGTTTATTACTGCAAATAACCTCCGCGACACTGCTGCTATCGCCAGCGCACGCGCTGCAGAGCTTTACGGATTAAATATCTTAGCTGATGGAATACAAGATGATCCAAATAACGTGACACGGTTTGTTATGTTGGCAAGAGAACCCATTATTCCAAGAACCGATCGTCCTTTCAAAACAAGTATTGTTTTTGCTCATGATAAAGGAACTTCAGTGCTTTTTAAAGTGCTTTCAGCTTTTGCGTTTAGGAATATCAGCTTAACTAAGATTGAATCTAGGCCTCATCGTGGCCGTCCGATTCGAGTTGTGGATGATGAAAGTGAAGGAACAGCTAAACATTTTGAGTATATGTTTTATATTGATTTTGAGGCTTCTATGGCTGAGGTTAGGGCACAAAATGCACTTGCTGAAGTTCAAGAGTTTACATCTTTCTTAAGAGTTTTGGGGAGTTATCCTATGGATATGACACCTTGGAGTCCTTCTTCTACTTTCTCATAG 1254 0.4737 MNSLTTPSSNSLTYLNRVRPSLNRIGSAPTRISVKCGYGFEFSTGSNRADWQSSCAILSSKVNSQRDESPVTGNDHVSAVNGHNNAVTDLQLVPIGNNKSLQPKPLSITDLSPAPMHGSTLRVAYQGVPGAYSEAAAGKAYPNSEAMPCDQFEVAFQSVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALAQCENTLTKLGLNVAREAVDDTAGAAEFITANNLRDTAAIASARAAELYGLNILADGIQDDPNNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRGRPIRVVDDESEGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSSTFS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1609 417 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 24 414 - -
Mtr4g1609 417 CDD ACT_CM-PDT 311 404 - -
Mtr4g1609 417 Gene3D - 123 295 - -
Mtr4g1609 417 CDD PBP2_Ct-PDT_like 120 301 - -
Mtr4g1609 417 ProSiteProfiles Prephenate dehydratase domain profile. 122 299 IPR001086 GO:0004664|GO:0009094
Mtr4g1609 417 SUPERFAMILY Periplasmic binding protein-like II 122 305 - -
Mtr4g1609 417 Pfam Prephenate dehydratase 123 301 IPR001086 GO:0004664|GO:0009094
Mtr4g1609 417 Gene3D - 202 288 - -
Mtr4g1609 417 ProSitePatterns Prephenate dehydratase signature 1. 275 297 IPR018528 GO:0004664|GO:0009094
Mtr4g1609 417 ProSitePatterns Prephenate dehydratase signature 2. 339 346 IPR018528 GO:0004664|GO:0009094
Mtr4g1609 417 ProSiteProfiles ACT domain profile. 313 404 IPR002912 -
Mtr4g1609 417 PANTHER AROGENATE DEHYDRATASE 24 414 - -
Mtr4g1609 417 Gene3D - 306 407 - -
Mtr4g1609 417 SUPERFAMILY ACT-like 294 406 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1609 Mtr-Chr4 28176353 28177937 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1609 K05359 - gmx:100809331 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1609 4 28176353 28177937 Mtr4g1609 4 28176353 28177937 ECH
Mtr2g2849 2 42105157 42106712 Mtr4g1609 4 28176353 28177937 PCT