Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2849 ATGAATACTCTATCTCCACCTCCCTCTTCTAACACCCTCAATTTCAACCACATAACAATAACACGGCCGTGGAAATTTCCAAACCGGCTTGGTCCGAACCGTGTTTCTGTCAAATGTGCTTACGGTTCAAGTTATGACACCGGTTCAACCCGAACCGACTGGCAAAGCTCATGCGCTATCTTATCTAGCAAAGTTGTTTCACAAGAACAATCTTCCACTTCCACCGCCGTCAACGCCGGCGCCGATGAAAACTTTGCAGCTATCAACGGCCACAAAACAAACATCACCGATCTCCAGCTTGTTCCCATCGGGAACCTCACCGGAGAAATTTCAAAGCCACTTCCACCAAAACCGTTAACAATCTCCGACCTAGCTCCGGCACCGATGCACGGCTCAAATCTCCGCGTCGCTTACCAAGGAGTCCCGGGAGCATACTCTGAAGCCGCCGCCGGAAAAGCTTATCCAAACTGCGAAGCAATTCCTTGCGACCAATTCGAAGTCGCTTTCCAAGCCGTCGAGCTTTGGATCGCCGACCGTGCTGTTCTCCCGGTAGAAAATTCCCTCGGAGGTTCAATCCACCGTAACTACGACCTCCTCCTCCGTCACCGTCTCCACATCGTCGGAGAAGTTCAACTCCCGGTCCATCACTGTCTCCTCGCTCTCCCCGGAATCAGAAAAGAATATCTGACACGTGTCATCTCTCATCCACAAGCTTTATCTCAATGCGAACACACATTAACAAAACTCGGCCTCAACGTCGCACGTGAAGCAGTTGACGATACTGCAGGTGCTGCGGAGTTTGTTGCAACTAACAATCTCCGCGACACTGCTGCTATCGCCAGCGCACGTGCAGCCGAGCTTTATGGATTAAATATCTTAGCAGATGGAATTCAAGATGACCCAAGTAACGTAACCCGATTCGTTATGTTGGCCAGAGAACCCATAATTCCACGTACGGATCGTCCATTTAAAACAAGTATTGTTTTCGCTCATGATAAAGGAACTTCAGTGCTTTTCAAAGTGCTTTCAGCTTTTGCGTTTAGGAATATTAGTTTAACGAAGATTGAATCAAGGCCACATCGTAACCGTCCGATTAGGCTTGTTGATGATGCAAATGTTGGAACTGCGAAGCATTTTGAGTATTTGTTTTATGTTGATTTTGAAGCTTCAATGGCTGAAGTTAGAGCACAAAACGCGTTGGCTGAAGTTCAGGAATTCACGTCTTTCTTGAGAGTTTTGGGTAGTTACCCTATGGATATGACACCCTGGACTACTCCTTAA 1281 0.4754 MNTLSPPPSSNTLNFNHITITRPWKFPNRLGPNRVSVKCAYGSSYDTGSTRTDWQSSCAILSSKVVSQEQSSTSTAVNAGADENFAAINGHKTNITDLQLVPIGNLTGEISKPLPPKPLTISDLAPAPMHGSNLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGIRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEFVATNNLRDTAAIASARAAELYGLNILADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYLFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWTTP* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2849 426 Gene3D - 130 218 - -
Mtr2g2849 426 SUPERFAMILY ACT-like 307 419 IPR045865 -
Mtr2g2849 426 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 13 424 - -
Mtr2g2849 426 ProSiteProfiles Prephenate dehydratase domain profile. 135 312 IPR001086 GO:0004664|GO:0009094
Mtr2g2849 426 ProSitePatterns Prephenate dehydratase signature 1. 288 310 IPR018528 GO:0004664|GO:0009094
Mtr2g2849 426 CDD ACT_CM-PDT 324 417 - -
Mtr2g2849 426 Gene3D - 219 300 - -
Mtr2g2849 426 CDD PBP2_Ct-PDT_like 133 314 - -
Mtr2g2849 426 ProSiteProfiles ACT domain profile. 326 417 IPR002912 -
Mtr2g2849 426 Pfam Prephenate dehydratase 136 314 IPR001086 GO:0004664|GO:0009094
Mtr2g2849 426 PANTHER AROGENATE DEHYDRATASE 13 424 - -
Mtr2g2849 426 Gene3D - 319 420 - -
Mtr2g2849 426 ProSitePatterns Prephenate dehydratase signature 2. 352 359 IPR018528 GO:0004664|GO:0009094
Mtr2g2849 426 SUPERFAMILY Periplasmic binding protein-like II 135 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2849 Mtr-Chr2 42105157 42106712 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2849 K05359 - gmx:100797636 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2849 2 42105157 42106712 Mtr2g2849 2 42105157 42106712 ECH
Mtr2g2849 2 42105157 42106712 Mtr4g1609 4 28176353 28177937 PCT