Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1579 ATGGATCAATTTGGAAGTATTGCTCACTTTCTTGAGGATAAGAATGTTTTGGTACTTGGTGCTGCTGGTTTCCTTGCAAAGATTTTTGTGGAGAAGATATTAAGAGTTCAACCTAATGTGAAGAAACTTTATCTTCTTTTGAGAGCTACGGATGCTGAATCTGCCACTAGAAGAATGCACAATGAGATTTTGCGAAAAGATTTGTTCAAATTGCTGAAGGAAAATCATGGAGCAAAGTTCAATAGCTTTATCTCAGAAAAAGTGACTATGGTGCCTGGAGACATTTCCCAAGAAAATTTCAATTTAAAGGACTCCAATCTACTTCAAGAGTTATACAATAAAACTGATGTCATTGTGAATTTAGCTGCAACAACTAACTTTGATGAAAGATATGATGTTGCATTGGGTTTAAATACATTTGGAGCCAAGCATGTCTTAAACTTTGCCAAAAATTGTATTAACCTCAGGGTGCTTGTCCACGTATCAACAGCATACGTTTGTGGAGAGAGAGGAGGACTTATAGTAGAGGATCCATACCAACTTGGTGTTTCACTAAATGGAGTGCAAGGACTAGACATTGATGAGGAAAAGAGAGTAGTTGAGGAGAAATTGAACATGCTTCAACAAGAGGGAGCTACTGAAAAAGATACTAGAATTGCCATGAAGGACTTAGGGATGGAAAGAGCAAAGTTATATGGATGGCCAAACACATATGTTTTTACAAAGGCAATGGGAGAAATGCTAGTGGGAACTATGAAGGAAAAATTGTCCATTGTTATTGTGAGACCTACAATCATTACCAGCACTTACAAAGAACCTTTCCCTGGTTGGGTTGAAGGAGTAAGAACCATAGACAGTTTAATTGTTGCTTATGGTAAAGGAAAATTAACATGCTTCCTTGCAGACTTAGAGGCAGTTTTTGATGTGATCCCTGCTGATATGGTGGTGAATGCAATGCTAGTGGCCATGGTAAGTCATGCAAATCAACCTTGTGATGATAGCATATATCACGTAGGTTCATCTGTTGGGAATCCAGTGAGATATGAGAGTCTCAGAGACTACTGCTTCAGATATTTTACGGCAAAACCATGTTTTGACAAGGAAGGAAAAGCCATCAAAGTTGGTAAAGTTACGGTATTGGAAAATATGAATAGCTTCCAAAGATACATGTACATTCGTTACTTGCTTCCATTAAAGGGATTAGAGCTAGTGAATGCAGCATTTTGTCGCTATTTTCAAAGTACATGTTTTGATATCAGCAGGAAGGTCCATACTGTGATGCGTTTGGTTGAACTTTACAGGCCCTATGTTTTCTTCAATGGCGTATTTGATAATATGAATGCAGAGAAGTTGCAAATAGCAGCAAGACAAAGTGGAGTAGAGATGGATTTATTTTACTTTGACCCAAAAATGATTAACTGGGAGGACTATTTCATGAACATTCATATTCCTGGCATTGTCAAATATTCCTTCAAGTGA 1479 0.3766 MDQFGSIAHFLEDKNVLVLGAAGFLAKIFVEKILRVQPNVKKLYLLLRATDAESATRRMHNEILRKDLFKLLKENHGAKFNSFISEKVTMVPGDISQENFNLKDSNLLQELYNKTDVIVNLAATTNFDERYDVALGLNTFGAKHVLNFAKNCINLRVLVHVSTAYVCGERGGLIVEDPYQLGVSLNGVQGLDIDEEKRVVEEKLNMLQQEGATEKDTRIAMKDLGMERAKLYGWPNTYVFTKAMGEMLVGTMKEKLSIVIVRPTIITSTYKEPFPGWVEGVRTIDSLIVAYGKGKLTCFLADLEAVFDVIPADMVVNAMLVAMVSHANQPCDDSIYHVGSSVGNPVRYESLRDYCFRYFTAKPCFDKEGKAIKVGKVTVLENMNSFQRYMYIRYLLPLKGLELVNAAFCRYFQSTCFDISRKVHTVMRLVELYRPYVFFNGVFDNMNAEKLQIAARQSGVEMDLFYFDPKMINWEDYFMNIHIPGIVKYSFK* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1579 492 PANTHER MALE STERILITY PROTEIN 2-RELATED 3 491 IPR026055 GO:0080019
Mtr4g1579 492 Pfam Male sterility protein 20 319 IPR013120 -
Mtr4g1579 492 PANTHER FATTY ACYL-COA REDUCTASE 3 491 - -
Mtr4g1579 492 Pfam Male sterility protein 393 492 IPR033640 -
Mtr4g1579 492 CDD FAR-N_SDR_e 14 363 - -
Mtr4g1579 492 Gene3D - 8 389 - -
Mtr4g1579 492 CDD FAR_C 392 489 IPR033640 -
Mtr4g1579 492 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 340 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1579 Mtr-Chr4 27548734 27555283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1579 111 491 Acyl Lipid Metabolism Gene Families AT4G33790 58.793 1.99e-173 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1579 K13356 - gmx:100788994 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1579 4 27548734 27555283 Mtr4g1579 4 27548734 27555283 ECH
Mtr2g2866 2 42281122 42291514 Mtr4g1579 4 27548734 27555283 PCT