Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2866 ATGGCTCAAGAGGTAGGAAGCATACTCAACTTTCTTGAGGGCAAGACCATTTTGGTTATTGGTGCCACTGGTTTTCTTGCAAAAATATTTTTGGAGAAGGTATTGAGAGTTCAACCAAATGTTAAAAAGCTTTTTCTTCTTTTAAGAGCTTCTGATGACAAATCTGCAGCTAGTCGCTTGCAAAATGAGATTTTAGCAAAAGACTTGTTTAACTTGCTAAACGAAAAAATGGGTACAAATTTCAAGTCTTTTATTTCGGAAAAGTTGACTGTGGTGCCTGGGGATATCACCTTTGAGGACTTGGGTTTGAAGGATTCCATTTTAAGGGAAGATATTTCCTCTCAAACAGATGTTATTATTAATTTGGCTGCAACTACTAATTTTGATGAAAGGTATGATATAGCATTGGATCTAAATACATTTGGAGTTAAACATATCATGAGCTTTGCGAAACAATGTATCAGACTCAAAGTGCTTGTCCATGTGTCAACAGCTTATGTATGTGGTGAAAAAAGTGGACTCATACTAGAAAGTCCTTATCTATTGGGCGATTCATTAAACGGTGTGGCTGGATTAGACATAAATGCCGAAAAGAAATTAGTAACCGAAAAATTAGGTGAGCTACAAGAGAAAGGAGCCACGGAGCATGAAATTAAAGTGGCCATGAAGGACCTAGGTATTACAAGGGCCAATGTGTATGGTTGGCCAAACACATACGTGTTTACAAAGGCACTTGGGGAGATGCTTGTGGAGAAATTGAAAGGAAACTTATCTGTTGTTATTTTACGTCCTGCCATTGTCACAAGTACATTAAGAGAACCTTTCCCTGGTTGGGTTGAGGGTCTCAGAACCATTGACAGCTTAGCTGTTGTTTATGGGAAAGGAAAACTAACATGTTTTCTTGGAGATATTAACGGTGTTGTTGATGCGATACCAGCTGACATGGTGGTCAATGCAATGTTAGTGGCTATGGTGGCTCATGCAAATCAACCTAGAGATGGGGTATATCATGTGGGTTCCTCTGTTAGAAACCCATTGAGATACCAAAGTTTTCATGACTATGGATTAAAATATTTCAAAGCAAAACCTTGGATAAACAAAGATGGAACGGTTGTTAAGGTTGGCAAAATGACTATATTAACCAACATGGCAAGCTTCCAAAGATACATATTCATTCGCTACCTTCTTCCATTAAAGGGACTCAAATTGGTCAATACAGCACTTTGCCAGTATTTTCAGGGAACTTATCTTGAGCTCAACAGGAAGATCCAAGTTGTGATGCGGTTGGTGGAACTTTACAGACCTTATTTATTCTTCAAGGGCATATTTGATGATTTAAACACTGAGAAGTTGCGCATGTCAGCAAGACAAAGTGGAACAGAGATAGATTTATTTTACTTCGACCCAAAAGAGATGGATTGGGAAGATTACTTTATGAACACTCATCTCCCTGGTTTAGTCAAGTACATTTTCAAGTGA 1479 0.3827 MAQEVGSILNFLEGKTILVIGATGFLAKIFLEKVLRVQPNVKKLFLLLRASDDKSAASRLQNEILAKDLFNLLNEKMGTNFKSFISEKLTVVPGDITFEDLGLKDSILREDISSQTDVIINLAATTNFDERYDIALDLNTFGVKHIMSFAKQCIRLKVLVHVSTAYVCGEKSGLILESPYLLGDSLNGVAGLDINAEKKLVTEKLGELQEKGATEHEIKVAMKDLGITRANVYGWPNTYVFTKALGEMLVEKLKGNLSVVILRPAIVTSTLREPFPGWVEGLRTIDSLAVVYGKGKLTCFLGDINGVVDAIPADMVVNAMLVAMVAHANQPRDGVYHVGSSVRNPLRYQSFHDYGLKYFKAKPWINKDGTVVKVGKMTILTNMASFQRYIFIRYLLPLKGLKLVNTALCQYFQGTYLELNRKIQVVMRLVELYRPYLFFKGIFDDLNTEKLRMSARQSGTEIDLFYFDPKEMDWEDYFMNTHLPGLVKYIFK* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2866 492 CDD FAR-N_SDR_e 15 363 - -
Mtr2g2866 492 Pfam Male sterility protein 393 492 IPR033640 -
Mtr2g2866 492 CDD FAR_C 392 491 IPR033640 -
Mtr2g2866 492 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 341 IPR036291 -
Mtr2g2866 492 Gene3D - 10 381 - -
Mtr2g2866 492 PANTHER MALE STERILITY PROTEIN 2-RELATED 4 491 IPR026055 GO:0080019
Mtr2g2866 492 PANTHER FATTY ACYL-COA REDUCTASE 4 491 - -
Mtr2g2866 492 Pfam Male sterility protein 21 320 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2866 Mtr-Chr2 42281122 42291514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2866 115 491 Acyl Lipid Metabolism Gene Families AT4G33790 61.008 3.38e-179 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2866 K13356 - gmx:100788680 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2866 2 42281122 42291514 Mtr2g2866 2 42281122 42291514 ECH
Mtr2g2866 2 42281122 42291514 Mtr4g1579 4 27548734 27555283 PCT