Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1513 ATGTCCATCAAAGAATGCGGCCACCACGACGACGAAGACCGACGCAACTTCCTCCGCCGCATAATCGCAGCCGTAGGAGCCTTCATTCTCCTAATACTCCTAACCATCTTCCTAATATGGATCATCCTTAGACCCACAAAACCACGTTTCATGATACAAGATGCCACCATTTACACTTTCAACATCTCTTCACCAAATTCCAATCCCTTCCCTATACCAAACACACTAACCCTAACAATGCAAGTCACACTCACAACTCACAACCCTAACAAAAGAATAGGAATCTACTATCAAAAACTTCATGTCTATGCTTCTTATAAGAGCCAACAGATCTCACTACCAACTTCAATTCCTGATACTTACCAAGGTCATAAAGATTTTACCATTTGGTCGCCGTTTATTTACGGTGTTGGCGTGCCGGTTTCGCCTTTTACGCTAAGTAATCTTCAGCAGGATCAGAATAATGGAATGGTTTTGGTTAATCTTAAGGTTAACGGAAGGGTTAAGTGGAAGGTTGGAAGATGGATCTCTGGAAGGTATCATATTTTTGTGAACTGTCCTGCTTATGTTAGGTTTTCCGGTGACCGGAATAATGGCGCCGGAGTTGTAGCTCCGGCGGTTAAGTTTCAGCTTTTGCAAAATTGTCATGTTGATGTTTAG 660 0.4258 MSIKECGHHDDEDRRNFLRRIIAAVGAFILLILLTIFLIWIILRPTKPRFMIQDATIYTFNISSPNSNPFPIPNTLTLTMQVTLTTHNPNKRIGIYYQKLHVYASYKSQQISLPTSIPDTYQGHKDFTIWSPFIYGVGVPVSPFTLSNLQQDQNNGMVLVNLKVNGRVKWKVGRWISGRYHIFVNCPAYVRFSGDRNNGAGVVAPAVKFQLLQNCHVDV* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1513 219 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 9 219 - -
Mtr4g1513 219 Pfam Late embryogenesis abundant protein 83 186 IPR004864 -
Mtr4g1513 219 PANTHER OS05G0367900 PROTEIN 9 219 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1513 Mtr-Chr4 26798105 26799143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1513 15 186 EF-hand Containing Proteins AT5G21130 20.930 8.84e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1513 - - gmx:100812905 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1513 4 26798105 26799143 Mtr4g1513 4 26798105 26799143 ECH
Mtr2g2909 2 42657380 42658800 Mtr4g1513 4 26798105 26799143 PCT