Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2909 ATGACTAAAGAATGTGACTTCCACGGAGATGAACGCCGCCAACTCATCCGTCGCATATTTGCCGCAATCCTCAGCTTTATAATCCTCATACTCTTCGTAATCTTCCTTATTTGGATCATCCTCCGACCAACCAAACCCCGTTTCATCCTCCAAGACGCAACCGTCTTCGCCTTCAACCTCTCCTCCACCGGAGAAACACCATCCTCAACCACCCCTACACCCAACACCATAACCCTCACTATTCAAGTCACTCTTTCATCCTTCAATCCAAACTCAAAAATAGGCATTTACTATCATAAACTTGACGCATACGCTTCCTATAGAGGACAACAAATCTCATTAGCCACTGAACTTCCACAAACATATCAAGGCCACCGTGACGTCGCGGTTTGGTCACCTATACTATACGGCGCGGCTGTTCCGGTTTCGCCTTACTTGTCGGAGATTCTAAGGCAAGATCAAACTTCAGGAGGAGTGTTGGTCAACGTTAAAGTCAACGGTAGGGTTAAGTGGAAAGTAGGGACTTGGGTTTCTGGAAGGTACCATATTGATGTGAACTGTCCGGCGTTTATAAAGGTCGCCGGTGATAAGGGTGATGATGGGTTCGGAGTTTCTGCTCCGGCGGTGAAGTTTCAGTTTTTGCAAAGTTGTGTTGTTGATGTTTAA 666 0.464 MTKECDFHGDERRQLIRRIFAAILSFIILILFVIFLIWIILRPTKPRFILQDATVFAFNLSSTGETPSSTTPTPNTITLTIQVTLSSFNPNSKIGIYYHKLDAYASYRGQQISLATELPQTYQGHRDVAVWSPILYGAAVPVSPYLSEILRQDQTSGGVLVNVKVNGRVKWKVGTWVSGRYHIDVNCPAFIKVAGDKGDDGFGVSAPAVKFQFLQSCVVDV* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2909 221 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 7 221 - -
Mtr2g2909 221 PANTHER OS05G0367900 PROTEIN 7 221 IPR044839 GO:0098542
Mtr2g2909 221 Pfam Late embryogenesis abundant protein 84 187 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2909 Mtr-Chr2 42657380 42658800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2909 13 187 EF-hand Containing Proteins AT5G21130 25.000 2.15e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2909 - - pvu:PHAVU_005G120900g 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2909 2 42657380 42658800 Mtr2g2909 2 42657380 42658800 ECH
Mtr2g2909 2 42657380 42658800 Mtr4g1513 4 26798105 26799143 PCT