Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1472 ATGGCCATGGATTGCGGCATCTATGGTTTCATCAACATCAAGCACCGCACGTTCTTCTTCTTCTTCACTTTCTTCTGTCTTGTTCTATCTTTTTCATCATGTTCTTCTTCTTCAACAGTTCAAATAAACTCAAACTCAATCTTAGTGGCTCTACTAGACTCACATTATACAGAACTGGCTGAACTCGTTGAAAAAGCTATGCTTCTACAAACACTAGAAGACACTGTCGGTAAAAACAACATCACAATCTTCGCACCAAAAAACCAAGCTCTTGAACGAGATCTTGACCCGAATTTCAAAACTTTCCTCTTAGAGCCACGAAATCTTAAATCTCTTCAGACTTTGTTAATGTCACATATTATTCCTACACGAATCAATGGATCTGTATCCAGCAAAACCGGGTCGACCCGACATAGAACATTGTCGCTTGAGCACAAGATAGTGATACAGTCGAATGAAACATCGCAACAATGGTTGGTTAATGGAGCTAAGATTGTTCATCTGAATGATGTGACAAGACCTGATGGTGTTATTCATGGAATTGAAAGGCTTCTGATTCCAAGGTCTGTTCAAGATGACTTTAACCGTCGTAGGAGTCTTGTTTCTATTGCTGCAATTAAACCGGAAGGTGCACCGGAGGTTGATCCGAGAACTCACCGGTTGAAAAAGCCGCCGCCACCGCAGAATCCTGGCTCGCCTCCGGCTCTTCCTATTTTTGATGCATTGGCTCCTGGACCTTCTCTGGCACCGGCGCCGGCACCAGGGCCTGGTGGACCCCACCATCATTTCAACGGGGAGGCACAGGTGAAAGATTTCATCCAGACACTGATACATTATGGAGGTTATAATGAGATGGCGGATATTCTGGTGAACTTAACGTCGTTAGCGACGGAGATGAGTAGGTTAGTATCAGAGGGTTATGTTTTAACAGTTCTAGCTCCAAATGATGAAGCTATGGCTAAGTTAACAACGGACCAATTGAGTGAACCGGGTTCACCGGAACAAATTATGTACTATCATTTGATTCCTGAGTATCAAACTGAAGAGAGTATGTATAATGCTGTTAGAAGATTTGGGAAGGTGAGGTATGATACTTTGAGATTGCCTCATAAGGTTGATGCTGAAGAAGCTGATGGGTCGGTTAAATTCGGGCATGGTGATGGTTCGGCATATTTGTTTGACCCGGATATTTATACGGATGGGAGGATTTCTGTGCAAGGGATTGATGGAGTTTTGTTTCCACATGAAGAAAAAGAGGAGGTTGTTGATAAGGCTGTGACCCAAGAACGGAAGGGTAAACCCGCTAAGGTTGTGGCCAAGCAAAGAAGAGGAAAATTGCTGGAAACGGCTTGCTGGATGCTTGGAACCTTTGGACAGCATTCTAGATTCAATTGTCAATAA 1401 0.434 MAMDCGIYGFINIKHRTFFFFFTFFCLVLSFSSCSSSSTVQINSNSILVALLDSHYTELAELVEKAMLLQTLEDTVGKNNITIFAPKNQALERDLDPNFKTFLLEPRNLKSLQTLLMSHIIPTRINGSVSSKTGSTRHRTLSLEHKIVIQSNETSQQWLVNGAKIVHLNDVTRPDGVIHGIERLLIPRSVQDDFNRRRSLVSIAAIKPEGAPEVDPRTHRLKKPPPPQNPGSPPALPIFDALAPGPSLAPAPAPGPGGPHHHFNGEAQVKDFIQTLIHYGGYNEMADILVNLTSLATEMSRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGSPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVDAEEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPHEEKEEVVDKAVTQERKGKPAKVVAKQRRGKLLETACWMLGTFGQHSRFNCQ* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1472 466 SUPERFAMILY FAS1 domain 44 188 IPR036378 -
Mtr4g1472 466 MobiDBLite consensus disorder prediction 208 264 - -
Mtr4g1472 466 Gene3D FAS1 domain 47 188 IPR036378 -
Mtr4g1472 466 SMART fasc_3 82 188 IPR000782 -
Mtr4g1472 466 SMART fasc_3 310 415 IPR000782 -
Mtr4g1472 466 MobiDBLite consensus disorder prediction 223 240 - -
Mtr4g1472 466 Pfam Fasciclin domain 55 187 IPR000782 -
Mtr4g1472 466 Pfam Fasciclin domain 292 414 IPR000782 -
Mtr4g1472 466 ProSiteProfiles FAS1/BIgH3 domain profile. 43 185 IPR000782 -
Mtr4g1472 466 SUPERFAMILY FAS1 domain 248 415 IPR036378 -
Mtr4g1472 466 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 3 466 IPR044654 -
Mtr4g1472 466 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 3 466 - -
Mtr4g1472 466 ProSiteProfiles FAS1/BIgH3 domain profile. 269 412 IPR000782 -
Mtr4g1472 466 Gene3D FAS1 domain 262 415 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1472 Mtr-Chr4 26115959 26120207 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1472 - - adu:107477699 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2942 2 43051166 43053948 Mtr4g1472 4 26115959 26120207 PCT