Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2942 ATGGCTCACCACATCTCTTGCATTCTTCTTCTTCTTATCTCTCTAACCATTTTTTCTTCTTCATCTTCATCACCAACTAGTCAAATAAACTCAAACTCAATCCTAATAGCACTTCTCGACTCACATTACACTGAACTCACCTACCTAATCGAAAAAGCAAATCTCTTACAAACACTAGAAAACACTGTCTCAAAACACAACATCACTATCTTTGCACCAAACAACGTAGCACTCGAACGTAACCTTGACCCAGATTTCAAACACTTTCTTCTCCAACCCGGTAACATTCTTTCCCTCCAAACCCTCCTTCTTTCCCACGTCATTCCAACCCGAATCCAATCCGGGTCAACCCGTTTCAAATCCATCTCTGACTATCACCTCCACCTTGAAACAAATACCACCACCGGAGAATTCATGGTTAACCAAGAGAATGTAACCCACCCGAATGACATTACCCGACCCGACGGTGTCATCCACGGTATTCAGAAAATTCTTATCCCACGCGCCGTCGTGGATGATTTCAACAACCGTCGTAGTCTCAGTTCAATCACCGCTGTTAAACCAGAAGGAGCACCAGAAGCTGACACGAGAAAATTGAAAAAATCTTCACCGGAAAAACCAGGTTCACCACCGGAGATTCCGATTTATGAAGCTTTAGCTCCGGGACCATCACTAGCTCCGGCACCGGCGCCGGGACCAGGAGGACCACACCATCACTTCAACGGAGACTTACAAGTGAAGGATTTCATCAAAACGTTACTACATTACGGTGGTTATAAAGAAATGGCGGATATACTCGTAAACCTAACGTCCTTAGCGACGGAGATGAGTCGTTTAGTCTCGGAGGGTTATGTTTTAACGGTTTTGGCGCCGAATGACGAAGCAATGGCGAAGTTAACGACGGAGGAGTTAAGTGAACCGGGTTCACCGGAGGAGATAATGTATTACCATATTATCCCTGAGTATCAAACGGAAGAGAGTATGTATAATGCTGTTAGGAGATTTGGGAAGGTTAGGTATGAGACTTTGAGGTTGAAGTATAAGGTTGTGGCTCAGGAAGCTGATGGGTCTGTTAAATTTGGAGATGGTGATGGGTCGGGTTATTTGTTTGATCCGGATATTTATACCGATGGGAGGATTTCTGTTCAAGGGATTGATGGGGTTTTGTTTCCTATGAAGGAGGAGAAAGAAGTTGTGCCGGTGGAGCAGGTTAAACCCATTTCGATGATGGGTCAACCCAGGAAAGGCGTCGTTGAACACAGAAGAGGGAAACTACTGGAAACAGCATGCTGGATGCTTGGAACCTTTAGAAACCATTCTAGATTCACCTCTTGTCAATGA 1341 0.4467 MAHHISCILLLLISLTIFSSSSSSPTSQINSNSILIALLDSHYTELTYLIEKANLLQTLENTVSKHNITIFAPNNVALERNLDPDFKHFLLQPGNILSLQTLLLSHVIPTRIQSGSTRFKSISDYHLHLETNTTTGEFMVNQENVTHPNDITRPDGVIHGIQKILIPRAVVDDFNNRRSLSSITAVKPEGAPEADTRKLKKSSPEKPGSPPEIPIYEALAPGPSLAPAPAPGPGGPHHHFNGDLQVKDFIKTLLHYGGYKEMADILVNLTSLATEMSRLVSEGYVLTVLAPNDEAMAKLTTEELSEPGSPEEIMYYHIIPEYQTEESMYNAVRRFGKVRYETLRLKYKVVAQEADGSVKFGDGDGSGYLFDPDIYTDGRISVQGIDGVLFPMKEEKEVVPVEQVKPISMMGQPRKGVVEHRRGKLLETACWMLGTFRNHSRFTSCQ* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2942 446 Pfam Fasciclin domain 269 360 IPR000782 -
Mtr2g2942 446 Pfam Fasciclin domain 42 167 IPR000782 -
Mtr2g2942 446 Gene3D FAS1 domain 245 391 IPR036378 -
Mtr2g2942 446 ProSiteProfiles FAS1/BIgH3 domain profile. 30 165 IPR000782 -
Mtr2g2942 446 SUPERFAMILY FAS1 domain 38 167 IPR036378 -
Mtr2g2942 446 SMART fasc_3 69 168 IPR000782 -
Mtr2g2942 446 SMART fasc_3 287 392 IPR000782 -
Mtr2g2942 446 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 446 - -
Mtr2g2942 446 SUPERFAMILY FAS1 domain 225 391 IPR036378 -
Mtr2g2942 446 Gene3D FAS1 domain 35 168 IPR036378 -
Mtr2g2942 446 ProSiteProfiles FAS1/BIgH3 domain profile. 246 374 IPR000782 -
Mtr2g2942 446 MobiDBLite consensus disorder prediction 183 239 - -
Mtr2g2942 446 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 446 IPR044654 -
Mtr2g2942 446 MobiDBLite consensus disorder prediction 191 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2942 Mtr-Chr2 43051166 43053948 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2942 - - gmx:100782264 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2942 2 43051166 43053948 Mtr4g1472 4 26115959 26120207 PCT