LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr4g1466	ATGGCGGAAACCCTAAGTCCTACCAAACACCGTCTCCCAGTTGCTGCACGCATCCAATCTCCCACCAGCCCCTTCATCTTAGGCTCCAATGACGACCAGCTCGAACGCGCTCAAGCACGTGCAGCACGCGCCGCTGCAATCCGCCGCAAGAATCTCCCGGTTTCGCAATCTCTCGAGGCCGACTCCGATCCGTGTCTTAATAAACAGCAGATCTTCGATTTGTTCCAGAATTGTATAAAGCTCGCCAGCGAAAATAAAATTAATCAGAAAAATACTTGGGAGTTGAACTTGATTGATCATCTTACTGATATTATTAAGGCTGAAGAAGAGAATGATACTGAGACTAATTTTCAGAAGGCAAGCTGCACTCTTGAGGCCGGTGTCAAAATTTATTCACTCAGGGTGGATTCGGTTCATTCTGAGGCATATAAAGTCCTTGGTGGGATGAATAGAGCAGGTCAAGAAGCTGAGCAAGACACTACACTGGAGGGTGTTAATGTTGAAAATGGACAAGAAGGAAGCAGGAAAGAGACAGATAAAAAGTTGTCACCTTTGTCAACACTGGAATCATCTTTTGAGGTTCTCAATGTAAAGAAGTTTGATGCTGCCTTTGTCGTTGATCCCCTGTATCGCCAGACAACTGCAAAATTTGACGAAGGAGGAGCCAAAGGTCTTTTAATGAATAATCTCGGTGTATATGGTGGATGTAGGCTGCTGTTTGATTCACTAGAAGTACCTGCAAAGTGTATGGAAAGCCAAAATGAACCTGATATTTCAGATACCATTGATCTTTCTTTTGCCAGAGATTGTGTTGAGGAGATAGTATTAGAGATGCGTGTGAAAGATGAAATTTCTCCAACTCTGAGGACTATAGTAAACCAGTTCGATGAAAATAATAAAAGGCCTACTGGTTTTCAACTTCCTGGCCAGAATTCAGCGGAAGAGCTTGATGCCGATTTTAATTGTGAAAATGGCGCTGACAGAGAAGAATATGACAATGGCGCGACCTGGAGTGATGATCATGATGACCAACCAGTCATTGCTGACCTAGGCTCTAATGATGCAGACCCAAGTTTCTCTAGTTATCCTCAGGAAAATGAGCAGTTTCCCTCCACAGATTCTGATATGGATGATAGATTTGAAAATGTTGATGGTTTCTTATTCTTGAGTCTGGGTTTTAATTCAAAACATAATGCATGGGCAGGCCCTGATCATTGGAAGTATAAAAAATCCAAAGTCTCTGAGGTTCAACCTACTTCCGAAGATGGGTCAACCCTGAAACCTAGGCAGACAAAGAGTAAGAAACAAGCCGAAGTTGATTTAGATTTCACAAATTCTCTGGAGAAAGACTTGTCTGATATATTTGCTCCTCCGAAGAATCCCAAAACATTACTTCTCCCTGAAAGCAGATCGCCTTGCAACACAAAACTTCCAGAGGACTGCCACTACCAGCCAGAGGAACTTGTCAAGCTATTTCTGCTTCCGGATGTGAAGTGTCTTGGGAGGAGGGCAAAAAGATTCTCAGATGCAGATGGATCTAGAGATCAATTCAACGAGAATGATCCATTCCCTTCTTGGGACAATGGAAGTGCTTGCGGTGATGATGAGGCTGGTGATTATGAAGGTGATCATCATAGTGACATAGAGGATCCAGGCACTCTTATTACACAGCCACGTCAGGTCAGTAAAATAGAAGTCCAGTATGACAAAACGTCCAAACAGGTTGATGTTCAAGTGCTAAAAGTTACTCTTTGGGACCACGTTCAAGAATCTGTTAAGCTTTCTCCTGTTCAGGATCAAGAAGAGATAGTATCTTTCAAAAATTTATTGGCTAATTTTCCTGGTGAATGCAATGCCGCTGCAAACATCAGTGACATTTCTCCTCATTTGTGCTTCATATGTTTACTGCATTTGGCAAATGAGAAAGGATTGAGTATCCAAAGCTTCCCCAACTTGGATGATCTTTCAATATGCCTTCCACCTGTTGGTGATACTCATTAA	2001	0.4258	MAETLSPTKHRLPVAARIQSPTSPFILGSNDDQLERAQARAARAAAIRRKNLPVSQSLEADSDPCLNKQQIFDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEEENDTETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEQDTTLEGVNVENGQEGSRKETDKKLSPLSTLESSFEVLNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGGCRLLFDSLEVPAKCMESQNEPDISDTIDLSFARDCVEEIVLEMRVKDEISPTLRTIVNQFDENNKRPTGFQLPGQNSAEELDADFNCENGADREEYDNGATWSDDHDDQPVIADLGSNDADPSFSSYPQENEQFPSTDSDMDDRFENVDGFLFLSLGFNSKHNAWAGPDHWKYKKSKVSEVQPTSEDGSTLKPRQTKSKKQAEVDLDFTNSLEKDLSDIFAPPKNPKTLLLPESRSPCNTKLPEDCHYQPEELVKLFLLPDVKCLGRRAKRFSDADGSRDQFNENDPFPSWDNGSACGDDEAGDYEGDHHSDIEDPGTLITQPRQVSKIEVQYDKTSKQVDVQVLKVTLWDHVQESVKLSPVQDQEEIVSFKNLLANFPGECNAAANISDISPHLCFICLLHLANEKGLSIQSFPNLDDLSICLPPVGDTH*	667

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr4g1466	666	MobiDBLite	consensus disorder prediction	154	182	-	-
	Mtr4g1466	666	MobiDBLite	consensus disorder prediction	509	538	-	-
	Mtr4g1466	666	PANTHER	CONDENSIN COMPLEX SUBUNIT 2	2	662	-	-
	Mtr4g1466	666	PIRSF	Condensin_H	1	270	IPR022816	GO:0000796\|GO:0007076
	Mtr4g1466	666	PIRSF	Condensin_H	265	551	IPR022816	GO:0000796\|GO:0007076
	Mtr4g1466	666	PIRSF	Condensin_H	540	660	IPR022816	GO:0000796\|GO:0007076
	Mtr4g1466	666	MobiDBLite	consensus disorder prediction	324	347	-	-
	Mtr4g1466	666	Pfam	Condensin complex subunit 2	24	657	IPR022816	GO:0000796\|GO:0007076
	Mtr4g1466	666	MobiDBLite	consensus disorder prediction	324	373	-	-
	Mtr4g1466	666	MobiDBLite	consensus disorder prediction	411	437	-	-
	Mtr4g1466	666	MobiDBLite	consensus disorder prediction	154	168	-	-
	Mtr4g1466	666	MobiDBLite	consensus disorder prediction	354	370	-	-
	Mtr4g1466	666	PANTHER	CONDENSIN COMPLEX SUBUNIT 2	2	662	IPR022816	GO:0000796\|GO:0007076

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr4g1466	Mtr-Chr4	26056654	26062166	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr4g1466	K06676		-	gmx:100799781	1053.89

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr4g1466	4	26056654	26062166	Mtr4g1466	4	26056654	26062166	ECH
	Mtr2g2947	2	43096827	43102599	Mtr4g1466	4	26056654	26062166	PCT