Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2947 ATGGCGGAACTCGCAAGCCCTAATCCAACAACGGTTCACAAAAAGCGACTTCCGACGCCTGCAACCACTTTTTTCGTCGGCTCCAATGACGACCAACTCGAACGCGCCGCTGCTCGTGCTGCACGCGCTGCTGCCATCCGCCGTACTGTTAACTTCCAATCTCAACCCTCCGATTCTGATCCCTGTCTCAATAAGCAACAGATTCTTGAGTTGTTCCATAATTGCATTAAGCTTGCTTCAGAAAATAAAATTAATCAGAAAAATACATGGGATTTGGATTTGATTGATCATCTTACTGATATTATTAGGGCTGAAGATGACAATAATACGGAGACTAATTTTCAAATGGCAAGCTGCACTCTTGAAGCTGGAGTCAAAATTTATTCATTAAGGGTGGATTCAGTGTATTCTGAGGCATATAAAGTCCTTGCTAGAATGAGTAGGGTGGGCCAAGAAACTGAGCAAGACGCTACTCTAGCGAGTGTTAATGGTGAAGGTGGACGAGAAGAAAGCAAGAAAGGAATAGACAAAAAGTTGTCACCTTTGTCAACACTGGAATCATCTTTTGAAGCTCTTAATGTAAAGAAGTTTGATGTTGCGTTTGCTGTGGATCCCCTCTATCGTAAAACATCAGCAAAATTTGATGAAGGGGGAGCCAAGGGTCTTTTGATGAATAACCTCGGGGTATATGGTAGATGTAGGGTGCTTTTTGATTCACTAGATGTGCCAGGGAAGTATTTAGCTAGTCAAAACGAACATGATGTTTCAGATACAGTGGATCTTTCTTTTGCAAGAGATTGTGTTGAACAGATGTTATCGGACATGCAAATTAAGGAGGAAATTTCTCCAACTCTCAGGGTGATAGTAAATATATTAGACGAAACTGATAGAAGGCCTTTTGACTTTCAATCTAATGGGCAGAAATCATCACAAGAGTTTGATGCAGCTATTGATTGTGAAGTTGGCGCTGAAATGGAAGATTACGAGAACTTCCCAACTGGGCCCTATGAACATGACAACCAAACATTTGTCAACGAAATGGGCTCTAATGATGCAGACCCTAATGTTCCAAGTTATCCTCAGGAGGAAGAACCTTTTCCTTCCCAAGACCTTGAAATGGATGAACTATTTGGAAATGTCGACGAGTATCTATCTTTTAGTCTGGGTTTTAGGTCAAAGAAAAATGCGTGGGCTGGTCCTGATCATTGGCAGTACCAAAAAGCTAAAGGTTCAGAGTCAGAAGTTCATTGTTCAACTGAAGATGCATCAACCCTCAAAACTAGGCCGCCAAAGACTATGAAACAGATCGAAGTTGATTTAGATTTCACAAATTTTCTTGGGAAAACACCTCCAGATATCTTTGCTCCTCCAAAGAGTCCCAAATCGTTATTACTTTCTGAAAATAGACCTCATTGTGTTACAAAACTCCCAGAGGACTGCCACTATGAGCCAGAGAATCTTGTCAAGTTATTTCTTTTGCCTGATGTAAAGTGTCTTGGGAGGAGGACGAGAAAGCTCTCAGGTGTATATACTGATGGATCGACAGAGCAATGCAACAACAATGAACCATTCAATTCATGGGATAATGGAAGTGTTTGTGATGGTGAGTATGATGATGCACATAGTGACATGGATGACTCAAGCACACTTATTTCTCAGGCTCGTCAGATCAATAAAATTGAAGTTCAATATGACAAAACGTCCAAACAAGTTGATGTTCAGGCACTGAAACTTACTCTTTGGAACCATATTGAAGAATCCGTTCACCTTCGTTTTCAGGGTGAAAAAGAAACGGTATCTTTCAGAGATGTTTTGGCCAACTTTCCAAGTGAATGCAATGCTTCAGCAACTGTTACCGACATATCTCCACATTTGTGTTTCATATGCCTATTGCATTTGGCTAATGAGAAAGAGTTGAGCATCCAAAGCTGTCCCGATTTGGATGATCTTCACATATATATGCCTACCTGA 1971 0.4099 MAELASPNPTTVHKKRLPTPATTFFVGSNDDQLERAAARAARAAAIRRTVNFQSQPSDSDPCLNKQQILELFHNCIKLASENKINQKNTWDLDLIDHLTDIIRAEDDNNTETNFQMASCTLEAGVKIYSLRVDSVYSEAYKVLARMSRVGQETEQDATLASVNGEGGREESKKGIDKKLSPLSTLESSFEALNVKKFDVAFAVDPLYRKTSAKFDEGGAKGLLMNNLGVYGRCRVLFDSLDVPGKYLASQNEHDVSDTVDLSFARDCVEQMLSDMQIKEEISPTLRVIVNILDETDRRPFDFQSNGQKSSQEFDAAIDCEVGAEMEDYENFPTGPYEHDNQTFVNEMGSNDADPNVPSYPQEEEPFPSQDLEMDELFGNVDEYLSFSLGFRSKKNAWAGPDHWQYQKAKGSESEVHCSTEDASTLKTRPPKTMKQIEVDLDFTNFLGKTPPDIFAPPKSPKSLLLSENRPHCVTKLPEDCHYEPENLVKLFLLPDVKCLGRRTRKLSGVYTDGSTEQCNNNEPFNSWDNGSVCDGEYDDAHSDMDDSSTLISQARQINKIEVQYDKTSKQVDVQALKLTLWNHIEESVHLRFQGEKETVSFRDVLANFPSECNASATVTDISPHLCFICLLHLANEKELSIQSCPDLDDLHIYMPT* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2947 656 PIRSF Condensin_H 540 655 IPR022816 GO:0000796|GO:0007076
Mtr2g2947 656 PIRSF Condensin_H 262 547 IPR022816 GO:0000796|GO:0007076
Mtr2g2947 656 PIRSF Condensin_H 2 269 IPR022816 GO:0000796|GO:0007076
Mtr2g2947 656 Pfam Condensin complex subunit 2 540 652 IPR022816 GO:0000796|GO:0007076
Mtr2g2947 656 Pfam Condensin complex subunit 2 29 543 IPR022816 GO:0000796|GO:0007076
Mtr2g2947 656 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 656 IPR022816 GO:0000796|GO:0007076
Mtr2g2947 656 MobiDBLite consensus disorder prediction 156 175 - -
Mtr2g2947 656 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2947 Mtr-Chr2 43096827 43102599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2947 K06676 - gmx:100777082 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2947 2 43096827 43102599 Mtr2g2947 2 43096827 43102599 ECH
Mtr2g2947 2 43096827 43102599 Mtr4g1466 4 26056654 26062166 PCT