Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1422 ATGGCTACTTCTACTCATGTTGACAAAGATATTGATGAACCTTTACTAGTACCTAGTGAACCAACACCAATACTATTATCATCATTCACTCATTCATTTGGTTCAAAGCATGAATCAGATGGTGAACTTGAAAGAATACTCTCAGATACAAGTGTTCCTTTTGTGAAACGTATTAAACTTGCTACATGGGTTGAATTTAAGCTACTTTTTTACCTAGCTGCACCTTCTGTAATTGTGTACCTTATCAACTATGTGATGTCAATGTCTACTCAAATATTTTCTGGTCATCTTGGTAATTTGGAGCTTGCTGCTGCTTCCCTTGGAAATAATGGTATCCAAATATTTGCTTATGGACTCATGTTGGGCATGGGGAGTGCTGTTGAGACACTATGTGGACAAGCATTTGGAGCAAAAAAATATGAAATGTTAGGCATATATTTGCAAAGATCAACAGTGCTTCTCACAATAGCCGGTTTAATTTTAACAATAATATACATATTCTCCGAACCAATTTTAATATTTCTAGGAGAATCACCAAAAATTGCATCAGCAGCATCCCTTTTTGTCTTTGGTTTAATCCCACAAATATTTGCCTATGCTATAAACTTTCCAATCCAAAAATTTCTTCAAGCACAAAGCATAGTAGCACCAAGTGCATACATATCAGCAGCAACATTGGTTATTCACCTTGTGTTAAGTTATGTTGTTATCTACCAAATTGGGCTTGGTTTATTAGGTGCTTCATTGGTTTTGAGTATTTCTTGGTGGATAATTGTGATTGCACAATTTGTTTATATTGTGAAGAGTGAGAAATGTAAGCATACTTGGAAAGGGTTTAGTTTTCAAGCATTTTCAGGGTTGCCAGAGTTTTTTAAATTGTCAGCTGCTTCAGCTGTGATGTTGTGTTTAGAGACTTGGTACTTTCAAATCTTGGTTTTGCTTGCTGGGTTACTTCCTCATCCTGAATTGGCTCTTGATTCTCTTTCTATTTGTGTGAGAGTGAGCAATGAATTAGGAGCAGGAAATTCAAAATCAGCTTCATTTTCAGTGGTGGTGGTAACAGTGATTTCATTCATAATATGTGCAATTATAGCACTTGTGGTGCTTGCATTAAGGGATGTTATCAGCTATGTCTTCACAGAAGGTGAAGAGGTTGCTGCTGCTGTCTCAGATCTCAGTCCACTCCTTGCTCTTGCCATTGTCCTCAATGGCGTTCAGCCTGTCTTATCTGGGGTGGCCGTTGGATGTGGATGGCAAACATTTGTTGCATATGTAAACGTTGGTTGTTATTACGGACTTGGCATACCGTTGGGTGCAGTTCTTGGTTTCTATTTCAAATTTGGTGCCAAGGGAATATGGTTGGGAATGTTAGGTGGCACAGTTTTGCAAACAATTATTTTAATGTGGGTAACATTTCGAACGGATTGGAATAATGAGGTTGTAGAATCAAATAAGAGGCTAAACAAGTGGGAGGGCAAGACCGAGTCACTCCTCAAGAATTGA 1503 0.3799 MATSTHVDKDIDEPLLVPSEPTPILLSSFTHSFGSKHESDGELERILSDTSVPFVKRIKLATWVEFKLLFYLAAPSVIVYLINYVMSMSTQIFSGHLGNLELAAASLGNNGIQIFAYGLMLGMGSAVETLCGQAFGAKKYEMLGIYLQRSTVLLTIAGLILTIIYIFSEPILIFLGESPKIASAASLFVFGLIPQIFAYAINFPIQKFLQAQSIVAPSAYISAATLVIHLVLSYVVIYQIGLGLLGASLVLSISWWIIVIAQFVYIVKSEKCKHTWKGFSFQAFSGLPEFFKLSAASAVMLCLETWYFQILVLLAGLLPHPELALDSLSICVRVSNELGAGNSKSASFSVVVVTVISFIICAIIALVVLALRDVISYVFTEGEEVAAAVSDLSPLLALAIVLNGVQPVLSGVAVGCGWQTFVAYVNVGCYYGLGIPLGAVLGFYFKFGAKGIWLGMLGGTVLQTIILMWVTFRTDWNNEVVESNKRLNKWEGKTESLLKN* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1422 500 CDD MATE_eukaryotic 65 480 IPR045069 GO:0042910|GO:1990961
Mtr4g1422 500 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 487 - -
Mtr4g1422 500 Pfam MatE 75 235 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr4g1422 500 Pfam MatE 331 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr4g1422 500 PANTHER PROTEIN DETOXIFICATION 19 487 - -
Mtr4g1422 500 TIGRFAM matE: MATE efflux family protein 75 335 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1422 Mtr-Chr4 25164145 25184703 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1422 K03327 - gmx:100790437 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1422 4 25164145 25184703 Mtr4g1422 4 25164145 25184703 ECH
Mtr2g2972 2 43367280 43371870 Mtr4g1422 4 25164145 25184703 PCT