Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2972 ATGGCTTCATTGAAGCAAAACAGTGCTGAAGAACCACTATTGTTCAACCACAGTGGTACATCTCAGAAGCACCATGAATCTGATGGTGAGCTTGAAAGGATACTATCAGACACCACCGTGCCATTCTTCAGCCGTATCGGCTCCGCCACATGGATTGAGCTCAGACTCCTTTTCTTGTTGGCTGCACCAGCTGTTTTTGTTTATCTTATTAATTATGTTATGTCTATGTCCACACAAATCTTTTCCGGCCACCTTGGTAATCTTGAACTTGCCGCGGCGTCTCTGGGGAACACCGGGATTCAAATCTTTGCTTATGGTCTCATGTTGGGTATGGGAAGTGCAGTTGAGACACTATGTGGACAAGCATATGGAGCAGAAAAATATGGCATGCTAGGAACATATTTACAAAGATCAACAATTCTTCTAACAATAACCGGTTTTTTCCTCACAATTATTTACGTATTAAGTGAACCAATCCTAGTATTCATTGGACAATCACCAAGAATAGCTTCTGCAGCAGCACTTTTTGTGTATGGACTTATCCCACAAATATTTGCTTATGCAGTAAATTTCCCAATCCAAAAATTTCTTCAAGCACAAAGTATAGTTCTACCAAGTGCATACATTTCAGCAGGAACTTTAGTTTTTCATCTAATATTAAGTTGGGTTGTTGTGTTTAAGATAGGGTTAGGACTATTGGGAGCTTCATTGGTTTTGAGTTTTTCTTGGTGGGTTATTGTTGTGGCACAATTTATTTATATTTTGAAGAGTGAGAAGTGTAAGAGGACTTGGAATGGGTTTACTTGGGAGGCATTTTCGGGGTTGCCGGAGTTTTTTAAATTGTCGGCCGCGTCGGCGGTTATGCTTTGTTTGGAGTCTTGGTATTTTCAGATTTTGGTTTTGCTTGCTGGACTTCTTCCTCAACCTGAGTTGGCTCTTGATTCTCTTTCTATTTGTACCACAGTTTCTGGATGGGTGTTCATGATCTCAGTTGGATTCAATGCAGCTGCAAGTGTGAGAGTGAGCAATGAACTAGGAGCAAGAAATCCAAAATCAGCATCATTTTCAGTGAAAGTGGTGACAGTGATATCCTTTATAATATCAGTAATAGCAGCACTAATTGTGCTTGCATTGAGAGATGTTATTAGCTATGTTTTCACTGAGGGTGAAGTGGTGGCTGCTGCTGTCTCAGATCTTTGTCCACTTCTCTCTCTTTCTCTTGTCCTCAATGGCATTCAGCCTGTCCTATCTGGGGTGGCTGTTGGGTGTGGATGGCAAGCTTTCGTTGCTTATGTGAATGTGGGTTGCTATTATATAGTTGGTATACCATTGGGGGCGGTTCTTGGCTTTTATTTCAATTTTGGTGCTAAGGGAATATGGCTAGGAATGCTTGGTGGAACCACTATGCAGACAATTATTCTAATGTGGGTCACATTTAGAACGGATTGGAACAAGGAGGTGAAAGAAGCAGCCAAGAGGTTGAACAAATGGGAGGAAAAGAAAAAGGAGCCCCTTCTAAACTAA 1524 0.4127 MASLKQNSAEEPLLFNHSGTSQKHHESDGELERILSDTTVPFFSRIGSATWIELRLLFLLAAPAVFVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAYGAEKYGMLGTYLQRSTILLTITGFFLTIIYVLSEPILVFIGQSPRIASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVLPSAYISAGTLVFHLILSWVVVFKIGLGLLGASLVLSFSWWVIVVAQFIYILKSEKCKRTWNGFTWEAFSGLPEFFKLSAASAVMLCLESWYFQILVLLAGLLPQPELALDSLSICTTVSGWVFMISVGFNAAASVRVSNELGARNPKSASFSVKVVTVISFIISVIAALIVLALRDVISYVFTEGEVVAAAVSDLCPLLSLSLVLNGIQPVLSGVAVGCGWQAFVAYVNVGCYYIVGIPLGAVLGFYFNFGAKGIWLGMLGGTTMQTIILMWVTFRTDWNKEVKEAAKRLNKWEEKKKEPLLN* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2972 507 TIGRFAM matE: MATE efflux family protein 63 460 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr2g2972 507 CDD MATE_eukaryotic 53 489 IPR045069 GO:0042910|GO:1990961
Mtr2g2972 507 PANTHER MULTIDRUG RESISTANCE PROTEIN 12 494 - -
Mtr2g2972 507 Coils Coil 480 500 - -
Mtr2g2972 507 Pfam MatE 285 446 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr2g2972 507 Pfam MatE 63 223 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr2g2972 507 PANTHER PROTEIN DETOXIFICATION 12 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2972 Mtr-Chr2 43367280 43371870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2972 K03327 - gmx:100795338 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2972 2 43367280 43371870 Mtr2g2972 2 43367280 43371870 ECH
Mtr2g2972 2 43367280 43371870 Mtr4g1422 4 25164145 25184703 PCT