Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1390 ATGCAGTTATTTCAGAAACACACAAAAGCACAGTCTTTGATTAATTTCATATTAGTTACATCTTCATTTTGTGGTTTTTATGTTCTTGTATCAGTACTAATATTAGGTACATCAAATTCAAAGCTATTACTACATTTGCAACATTCTTCAGAATCATCAAGAGATGTTTTCATAAAAAAAACAAACACAACTCTAGATGATATTGTGTTTGGTATTGCTTCAAGCAAGAGTTCATGGACAAAGAGAAAGGAGTATGTGAAACTATGGTGGAAAAACAACAATGCAATGAAGGGTTGTGTGTTTTTGGATAGTTTACCACAAAATGAAGATGACCCTTCTTCTCTTCCTCCTCTATGTGTCTCCGAAGACACTTCGCGGTTTCAATATACTTGCAAAGGTGGACTTCGATCAGCTATCCGGGTGGCACGTGTTGTCGCGGAGACTGTAGCCTTGAATCATTCAAATGTAAAGTGGTATGTGTTTGGAGACGACGACACGGTTTTCTTCCCGGAGAATTTGGTGAAGACTCTTTCTAAATATGATCATGAGCTTTGGTATTATATTGGTGCACACTCTGAGATTTATGAGCAGAATCGTTTGTTTGGTTTTGGAATGGCTTTTGGTGGTGCTGGTTTTGCTATTAGTTCATCTCTTGCTAAAGTTTTGGCAAAGGTTTTTGATTCTTGTTTGGAAAGGTACCCTCATCTATATGGAAGTGATGGTAGAGTTTACTCTTGTTTAGCAGAACTTGGTGTAGGATTGACACATGAACCAGGTTTTCATCAGGTTGATTTAACTGGAAATACCTTTGGCTTATTAGCTGCACACCCAGTAACACCCTTATTGTCTCTGCATCATCCAGATTACACAGATCCAATCTTTCCGAACATGACAACTACACAAGCTCTAAAACATTTATTTGAAGCAGTAAATGTTGATTCTCAAAGGATGTTGCAACAAACAATCTGCTATGATAGATGGTTTTCATGGACAATTTCAGTGTCATGGGGTTATGCTGTTCAAGTATTCCCCAACCATATGTTTTTGCCGGATGTTGTGAATGCGCGAGAAACATTCAAGCAGTGGAAAAAGGGAAATATGTTAGCAAAAGCTTATACTTTCAACACAAAACCAGTTCACCCTGATCCTTGTAAAAGATCTACTATCTTCTATTTCGATAGTGCCTCTTCTGGTAAAGACGGTATTATAAACAGTTATTATAAGAGATCTTTTCAAAATTGCTCAAAGGATTTGGTGTCTCCAAAGAAACTAGAAGTCATCAAAGTGGTTACTCATAAGCTAGACCTTGACATCAAACAGTTGCAGGCTCCAAGAAGGCATTGTTGTGATGTATTGCCCTCAAGTGCTAGTGACCAACTGGAAATTTCTGTTAGAGAATGCAAAGATGAAGAATTGATTTACAAGCACTGA 1431 0.3753 MQLFQKHTKAQSLINFILVTSSFCGFYVLVSVLILGTSNSKLLLHLQHSSESSRDVFIKKTNTTLDDIVFGIASSKSSWTKRKEYVKLWWKNNNAMKGCVFLDSLPQNEDDPSSLPPLCVSEDTSRFQYTCKGGLRSAIRVARVVAETVALNHSNVKWYVFGDDDTVFFPENLVKTLSKYDHELWYYIGAHSEIYEQNRLFGFGMAFGGAGFAISSSLAKVLAKVFDSCLERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLTGNTFGLLAAHPVTPLLSLHHPDYTDPIFPNMTTTQALKHLFEAVNVDSQRMLQQTICYDRWFSWTISVSWGYAVQVFPNHMFLPDVVNARETFKQWKKGNMLAKAYTFNTKPVHPDPCKRSTIFYFDSASSGKDGIINSYYKRSFQNCSKDLVSPKKLEVIKVVTHKLDLDIKQLQAPRRHCCDVLPSSASDQLEISVRECKDEELIYKH* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1390 476 Gene3D - 57 316 - -
Mtr4g1390 476 Pfam Protein of unknown function, DUF604 197 449 IPR006740 -
Mtr4g1390 476 PANTHER FRINGE-RELATED 9 474 - -
Mtr4g1390 476 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 9 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1390 Mtr-Chr4 24550219 24553082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1390 13 441 Glycosyltransferase AT1G05280 54.462 1.88e-167 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1390 - - gmx:100784602 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1390 4 24550219 24553082 Mtr4g1390 4 24550219 24553082 ECH
Mtr4g1390 4 24550219 24553082 Mtr2g2996 2 43623305 43625896 PCT