Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2996 ATGAAATCAGCAATCAAAACCAAATCTTTAACCAAATTAATTCCATTCTCATCTTCATTTTGTGCAATTTCTCTCTTTATATTTATTTCCATACTATTCTTTACCACATCAAAGATAGTAACAATTAACATTGGTTCTTCTTTACTACAGCCTACTGAATCTGATCCAACCAATGTTAATCATCTTGTATTTGGAATTGCTTCAAGTGGAAAATCATGGCCTAATAGGAAAAAATATGCCAAACTTTGGTGGAACAAAAATATGAAAGGTTGTGTTTTTGTGGATAATCTTCCACCTGAAGAAAATGACAACAACCTTAATAGTGATGATTCTGTTCCTCAAATTTGTGTCTCTGAAGACACTTCAAAGTTTAACTACACATATAGACCAGGTGGTTTAAGATCAGCGATCCGCGTGGCGCGTGTTGTGAAAGAAACTGCTGAATTGAATCATTCTGATGTTAGGTGGTATGTGTTTGGTGATGATGACACAATTTTCTTTCCTGAGAATCTTGTTAAGACACTTTCTAAATATGATCATAGACTTTGGTACTATGTTGGAGCTTATTCGGAAAATTATGAAGGGTCTCAAACTTTTGGTTTTGGAATGGCTTTTGGTGGAGGTGGTTTTGCTTTAAGTGCTTCTTTAGCAAATGTTTTAGCTAAGGTTTTTGATTCATGTATTGAAAGATATTCTCATCTTTATGGAAGTGATGCTAGGGTGTTCTCTTGCATAGCAGAACTTGGTGTTGGATTAACATATGAACCCGGTTTTCACCAGGTTGATTTGAGGGGAAACGTCTTTGGTTTATTGGCTGCACATCCATTAAGTCCCTTGTTATCCTTACATCACCCGGATATTACTGATGCAATCTTCCCTAATATGACAAATTCAAAATCACTACAGCATTTATTTGAAGCTGCATATGTTGATTCACAAAGAATGCTACAACAAACTGTTTGCTACGATAGACGGTTTTCACGGACAATTTCAGTGTCATGGGGATATGCTGTTCAAGTATTCCAAAGCAATGTGCTTTTACCAGATGTTCTTAGAGTGCAAGAAACATTCAAACCATGGAAGGAAAAACATGTTATGGCAGGAATATATACTTTTAGCAAAAGAGAACTTCACCATGACCCTTGTAAAAGACCTAAAATTTTCTATCTAGACAATGTATCTTCTGGTAAAGATGGAATCATTAGCAACTACACGAAATCTTTTTATAATTGTTCAAACGACAAGACATCGTCGAAGAATCTGGAGGTGATCAAAGTGGTTACAAATAACTTAGACCTTGATAGCAAACAGACTCCAAGAAGGCAGTGTTGTGATGTGTTGGACTCTAACTCTGGTCAATTAATGGAAATTGCAATTAGAGAGTGCAAATATGAAGAATTGATTTATATGCATTGA 1416 0.3545 MKSAIKTKSLTKLIPFSSSFCAISLFIFISILFFTTSKIVTINIGSSLLQPTESDPTNVNHLVFGIASSGKSWPNRKKYAKLWWNKNMKGCVFVDNLPPEENDNNLNSDDSVPQICVSEDTSKFNYTYRPGGLRSAIRVARVVKETAELNHSDVRWYVFGDDDTIFFPENLVKTLSKYDHRLWYYVGAYSENYEGSQTFGFGMAFGGGGFALSASLANVLAKVFDSCIERYSHLYGSDARVFSCIAELGVGLTYEPGFHQVDLRGNVFGLLAAHPLSPLLSLHHPDITDAIFPNMTNSKSLQHLFEAAYVDSQRMLQQTVCYDRRFSRTISVSWGYAVQVFQSNVLLPDVLRVQETFKPWKEKHVMAGIYTFSKRELHHDPCKRPKIFYLDNVSSGKDGIISNYTKSFYNCSNDKTSSKNLEVIKVVTNNLDLDSKQTPRRQCCDVLDSNSGQLMEIAIRECKYEELIYMH* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2996 471 PANTHER FRINGE-RELATED 3 469 - -
Mtr2g2996 471 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 3 469 - -
Mtr2g2996 471 Gene3D - 50 321 - -
Mtr2g2996 471 Pfam Protein of unknown function, DUF604 198 444 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2996 Mtr-Chr2 43623305 43625896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2996 57 471 Glycosyltransferase AT4G15240 52.983 3.99e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2996 - - gmx:100779943 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1390 4 24550219 24553082 Mtr2g2996 2 43623305 43625896 PCT