Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1385 ATGTTGTTGAACTCTTCCTTTATCTCACTTCCTAGTTTCTTCAAATCTCAAGAACTAGGAAGAACTAATCTTCTCATTCATAGAAATGGTTCTCCACTTCTATGTTACGCTACCAATACAAATGTTTCTCAAAGAAAATCAGCCAATTACCAACCCAATATTTGGAATTACGATATCTTACAATCCTTGAAACACGATTACGAGGATGCTCGATACGTGGATAGGAGTAGGAGGCTGCAAGAGGAAGTAAAAAGAATGATTAAGGATGAAAATGTAAATATTCTAGAGTTAATCGATACTGTGAAACAATTAGGTCTCAGTTACCACTTCGAAGAGGAGATAGGAGAAGCCCTTGATAGGTTTTTGTCTTTGGAAAAATGTAGTGGTAGAAACAATTTTGGCAGAAGTCTACATGAAACAGCCTTGAGATTTAGGCTCCTTCGAGAATATGGTTATGATATTTCACCAGATATTTTTGAGAAGTTTAAGGACCACAATGGAAATTTTAAGGCATGTCTTGTCCAAGATATCAAAGGAATGTTAAGTCTCTACGATGCATCATTTCTATCTTATGAAGGAGAACAAATTTTGGATGAAGCCAATGCTTTCACTAGCATTCACCTCAAAGACCTTAGTGAAGGTAGAAGCAGTATTCTCATTGATCAAGTGAATCATTCATTGGAGCTTCCACTATATCGTAGAGTCCAAAGTCTTGAAGCTCGATGGTTTATTGATTCATATGAAAATAGGAAGGATGCAAATAAGGTCTTGCTTGAAGCAGCTAAATTGAATTTCAATATTGTGCAATCAACTCTTCAACAGGATCTTAAAGAGATGTCAAGGTGGTGGAAGGGTATGGGACTAGCCCCAAGGTTAAGTTTTGGTCGTGATAGGCTAATGGAATGTTTCTTTTGGGCTGCTGGAATGACACCATTTGAACCTCAATTTAGTAATATCCGCAAGGGTTTAACAAAAGTGTGCTCTCTAATTACTTTAATTGATGACATTTATGATGTTTATGGCACCTTGGATGAATTAGAGCTTTTTACAACGGCAGTAGAAAGTTGGGATATTAATGCAATTCAAATTCTTCCGGAGTATATGAAGATATTCTTCTTGGCACTTTACAACACTGTCAATGATTTCACATATGACACAATTAAAGAAACAGGACATGACATTCTTCCCTACCTTGTCAAAGTGTGGTCTGATATGTTAAAAGCATTCCTACAAGAAGCAAAATGGTGTCACAACAAACACATGCCAAAATTTGATGACTACCTCAACAATGCATGGGTGTCTGTGTCTGGTGTAGTTTTACTCACCCATTCCTATTTTTTGCTAAATCGTAACATAACAAAGGAGGGGCTTGGGTACTTGGAAAATTGTCCTATGTTGTTGCAGACACCATCCATAATTTTTCGACTTTGCAATGATTTGGCTACTTCATCGGCGGAGTTAGAAAGAGGTGAAGGAGCTAATTCAATTATATGCTACATGAATGAAAATGGTGTTAGTGAGGAGGTTGCTTACAAACACATCCAAAATTTGCTTGATCAAACTTGGAAGAAGATGAACAAAGATCGAGTTATCAATTCACCTTCCTCAAAATATTTTTCAGAGACAATAATCAACCTTGCTAGAATTTCTCACTGCACGTACCAATATGGAGATGGTCATGGAGCCCCTGATACCTTGGCAAAGAATCGAATAAAGGCATTAATACTTGAACCAATTAATTAA 1743 0.3683 MLLNSSFISLPSFFKSQELGRTNLLIHRNGSPLLCYATNTNVSQRKSANYQPNIWNYDILQSLKHDYEDARYVDRSRRLQEEVKRMIKDENVNILELIDTVKQLGLSYHFEEEIGEALDRFLSLEKCSGRNNFGRSLHETALRFRLLREYGYDISPDIFEKFKDHNGNFKACLVQDIKGMLSLYDASFLSYEGEQILDEANAFTSIHLKDLSEGRSSILIDQVNHSLELPLYRRVQSLEARWFIDSYENRKDANKVLLEAAKLNFNIVQSTLQQDLKEMSRWWKGMGLAPRLSFGRDRLMECFFWAAGMTPFEPQFSNIRKGLTKVCSLITLIDDIYDVYGTLDELELFTTAVESWDINAIQILPEYMKIFFLALYNTVNDFTYDTIKETGHDILPYLVKVWSDMLKAFLQEAKWCHNKHMPKFDDYLNNAWVSVSGVVLLTHSYFLLNRNITKEGLGYLENCPMLLQTPSIIFRLCNDLATSSAELERGEGANSIICYMNENGVSEEVAYKHIQNLLDQTWKKMNKDRVINSPSSKYFSETIINLARISHCTYQYGDGHGAPDTLAKNRIKALILEPIN* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1385 580 PANTHER OS04G0344100 PROTEIN-RELATED 35 579 - -
Mtr4g1385 580 CDD Terpene_cyclase_plant_C1 45 578 IPR044814 GO:0010333|GO:0016102
Mtr4g1385 580 Gene3D Farnesyl Diphosphate Synthase 52 569 IPR008949 -
Mtr4g1385 580 PANTHER TERPENE SYNTHASE 12-RELATED 35 579 - -
Mtr4g1385 580 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 51 252 IPR008930 -
Mtr4g1385 580 SFLD Terpene Cyclase Like 1 C Terminal Domain 254 579 IPR034741 -
Mtr4g1385 580 Pfam Terpene synthase, N-terminal domain 54 227 IPR001906 GO:0010333|GO:0016829
Mtr4g1385 580 Gene3D - 92 253 IPR036965 GO:0010333|GO:0016829
Mtr4g1385 580 SUPERFAMILY Terpenoid synthases 254 579 IPR008949 -
Mtr4g1385 580 Pfam Terpene synthase family, metal binding domain 258 524 IPR005630 GO:0000287|GO:0010333|GO:0016829
Mtr4g1385 580 SFLD Isoprenoid Synthase Type I 254 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1385 Mtr-Chr4 24457994 24464231 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1385 K12742 K19968 ag:AAV36465 1175.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1385 4 24457994 24464231 Mtr4g1385 4 24457994 24464231 ECH
Mtr2g3008 2 43725485 43730127 Mtr4g1385 4 24457994 24464231 PCT