Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3008 ATGGCTTTTACTGAACTTAGAGTTTCATATCTCACAAGCACACTTGCTCGTTGTAATTTTGGAACTTCTACTTATCAATCACGCATCTTATCTCTACAAAAATCAAGTTCAAGGATTATGCATAGTAAATTATCGATCAAGTCCATTGCTCTCAATGAGAAGTTGTCACCTTTACAAACTGAAGATAAGACCAAAAGTTTGGGTCAAGTCAAAAGAAGAAGCCGAGAAGCATTGGTAAACTCAAATGATCCTATTGTAACATTGAAGATGATTGACTCAATCCAACGGCTGGGAATTGGTCATCATTTGGAAGATGAGATCAATATACAACTTGGGAGGATATGTGATTGGGACCTTTCTCAAGACCTCTTTGCCACATCCCTTCAATTTCGGTTACTGAGGCATAATGGCTGGACCACATGTTCTGATGTTTTCAGGAAGTTTTTGGACAAGAGTGGCAATTTCAATGAATCACTTACCAAAGATGTTTGGGGTATGTTGAGTTTATATGAGGCATCATATTTAGGGACAGAAGATGAAGAAATATTAAAAAAAGCCATGGAATTTTCAAGGGCTCGTCTAAGTGAGTTAATCCCACACCTTAGTCCTGAAGTGGGTAGGAACATTGCCAAATCCTTAACACTTCCAAAGCACCTAAGAATGGCAAGGTTAGAAGCAAGGAACTATATGGAAGAATATAGCAAAGGAAGTAACCAAATACCTGCTCTTCTGGAATTGGCAAAGTTAGACTCTGATATGGTTCAGTCATTACACCAAAGAGAATTAGCAGAAATATGCAGGTGGTGGAAAGAGTTGGGACTTGTTGAAAAACTTGGTTTTGCAAGAGATAGACCAACAGAGTGCTTCTTATGGACAGTAGGGATATTTCCAGAACCATGTCATTCAAATTGCCGCATAGAACTTACAAAAACCATATGTATTTTGCTAGTAATGGATGATATCTTTGACACTTATGGAACATTAGATGAACTTGTTCTTTTTACAAAGGCAATTAAAAGGTGGGACCTTGATGCAATGGATCAACTTCCAGAATACATGAAGATATGCTATATGGCATTATATAACACCACAAATGAAATTGCATACAAAATCCAAAAAGAACATGGACTAACTGTTGTTTCTTACTTGAAAAGAACATGGATTGACATATTTGAAGCATTTCTTGAAGAAGCCAAATGGTTCAATAATGGATGTGTGCCAAATTTTAAGACATATTTGGATAATGGAGTAATTTCTGCTGGATCATGCATGGCCTTGGTGCATGCTACTTTCCTCATTGGTGATGGTCTCTCAAAGGAAACTATGTCCATAATGATGAAGTCATATCCCAGACTCTTCACTTGCTCCGGCGAAATTCTTCGACTATGGGATGACTTAGGAACTTCAACGGAGGAACAAGAAAGAGGAGATAATGCTAGTAGTATACAATGCATGATGAGAGAGAATAATATTTCAGATGAAAATGAAGGAAGAATACACATAAGGATGCTACTAGGGAATTTGTGGAGAGAGCTGAATGGTCTTGCCACGACCAAAACCATACCTTTGTCTGTTGTCAAAGCTTCTCTTAATATGGCAAGAACTGCTCAAGTTATTTATCAACATGGAGATGATCAAAGCACATTTACTGTTGATGACTATGTGCAAACATTGATCTTCACATCATTACCTACTAGCCATTGA 1704 0.3756 MAFTELRVSYLTSTLARCNFGTSTYQSRILSLQKSSSRIMHSKLSIKSIALNEKLSPLQTEDKTKSLGQVKRRSREALVNSNDPIVTLKMIDSIQRLGIGHHLEDEINIQLGRICDWDLSQDLFATSLQFRLLRHNGWTTCSDVFRKFLDKSGNFNESLTKDVWGMLSLYEASYLGTEDEEILKKAMEFSRARLSELIPHLSPEVGRNIAKSLTLPKHLRMARLEARNYMEEYSKGSNQIPALLELAKLDSDMVQSLHQRELAEICRWWKELGLVEKLGFARDRPTECFLWTVGIFPEPCHSNCRIELTKTICILLVMDDIFDTYGTLDELVLFTKAIKRWDLDAMDQLPEYMKICYMALYNTTNEIAYKIQKEHGLTVVSYLKRTWIDIFEAFLEEAKWFNNGCVPNFKTYLDNGVISAGSCMALVHATFLIGDGLSKETMSIMMKSYPRLFTCSGEILRLWDDLGTSTEEQERGDNASSIQCMMRENNISDENEGRIHIRMLLGNLWRELNGLATTKTIPLSVVKASLNMARTAQVIYQHGDDQSTFTVDDYVQTLIFTSLPTSH* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3008 567 SUPERFAMILY Terpenoid synthases 241 548 IPR008949 -
Mtr2g3008 567 SFLD Terpene Cyclase Like 1 C Terminal Domain 242 560 IPR034741 -
Mtr2g3008 567 Pfam Terpene synthase family, metal binding domain 244 511 IPR005630 GO:0000287|GO:0010333|GO:0016829
Mtr2g3008 567 Pfam Terpene synthase, N-terminal domain 54 199 IPR001906 GO:0010333|GO:0016829
Mtr2g3008 567 Gene3D Farnesyl Diphosphate Synthase 56 548 IPR008949 -
Mtr2g3008 567 PANTHER OS04G0344100 PROTEIN-RELATED 58 563 - -
Mtr2g3008 567 PANTHER R-LINALOOL SYNTHASE PROTEIN-RELATED 58 563 - -
Mtr2g3008 567 Gene3D - 83 239 IPR036965 GO:0010333|GO:0016829
Mtr2g3008 567 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 55 237 IPR008930 -
Mtr2g3008 567 SFLD Isoprenoid Synthase Type I 242 560 - -
Mtr2g3008 567 CDD Terpene_cyclase_plant_C1 61 560 IPR044814 GO:0010333|GO:0016102
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3008 Mtr-Chr2 43725485 43730127 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3008 - - gmx:100807904 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3008 2 43725485 43730127 Mtr2g3008 2 43725485 43730127 ECH
Mtr2g3008 2 43725485 43730127 Mtr4g1385 4 24457994 24464231 PCT