Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1318 ATGGCCGCCGTAACTTCTTCTTTCTCATTCTCAACACTCACTCAATCTTCTCAGAGGAAATTAACCACACTTTCTTCCACTCGCTTCTTTGGTTCCGATTCAGATGCAGTTCGGTTTCGTTTCAGCATATCGTTGCGCTATGTTGGAGTTGTTCGAACTTCCAATTTCGTTTCCAAATTGGTTGTTCGGTGTTCCTCTTCTGTGTCAGACCCTCCAACTGTTTCTGAGACAAAGTTAAATTTTCTCAAGGCATATAAGCGACCGATACCTAGTATCTATAACTCCGTGCTACAGGAGCTCATTGTCCAGCAACATTTGATGAGATACAAGAAGTCATACCGTTATGATCCTGTATTTGCTCTTGGCTTTGTCACTGTATATGACCAACTCATGGAAGGGTATCCTAGTGATGAGGACAGAGATGCCATCTTCCAAGCATACATTAACGCATTGAAGGAAGATCCAGCCCAATACAGAGTAGATGCACAGAAGTTAGAAGAGTGGGCTCGTGCTCAAAATGCGACTTCTCTGATTGAGTTTTCATCTAGAGAAGGAGAAGTTGAGGGGACTTTAAAGGATATTGCAGAAAGAGCTGGTGGAAATGGGGATTTCAGTTATAGTCGTTTCTTTGCAGTCGGCCTTTTTCGACTTCTTGAGTTAGCAAATGCAATGGAACCAACAATTTTGGAAAAGCTTTGTTCGGCTTTGAATATCAACAAAAAAAGTGTTGATCGAGATTTGGACGTGTATCGCAATCTACTTTCTAAGTTGGTACAAGCTAAAGAGCTGCTAAAGGAATACATCGACAGGGAGAAGAAGAAAATAGAAGAAAGGGCTGAACCACAAAAGGCTAATGAGGCCATATCAAAATGTTTGGGACAAGAGCAGTTTTCTAACATGATCACCAGATAA 912 0.4145 MAAVTSSFSFSTLTQSSQRKLTTLSSTRFFGSDSDAVRFRFSISLRYVGVVRTSNFVSKLVVRCSSSVSDPPTVSETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKKSYRYDPVFALGFVTVYDQLMEGYPSDEDRDAIFQAYINALKEDPAQYRVDAQKLEEWARAQNATSLIEFSSREGEVEGTLKDIAERAGGNGDFSYSRFFAVGLFRLLELANAMEPTILEKLCSALNINKKSVDRDLDVYRNLLSKLVQAKELLKEYIDREKKKIEERAEPQKANEAISKCLGQEQFSNMITR* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1318 303 Coils Coil 250 270 - -
Mtr4g1318 303 Pfam Thylakoid formation protein 73 278 IPR017499 GO:0010207|GO:0015979
Mtr4g1318 303 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 289 IPR017499 GO:0010207|GO:0015979
Mtr4g1318 303 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 289 - -
Mtr4g1318 303 Hamap Protein Thf1 [thf1]. 68 276 IPR017499 GO:0010207|GO:0015979
Mtr4g1318 303 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 70 274 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1318 Mtr-Chr4 22360398 22365400 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1318 - - aip:107632658 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1318 4 22360398 22365400 Mtr4g1318 4 22360398 22365400 ECH
Mtr2g3037 2 44077779 44081085 Mtr4g1318 4 22360398 22365400 PCT