Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3037 ATGGCTGCACTAACTTCTTTGTCATTCTCAGCAACTTCTCAATGCTCACAGAGAAAATCCACTTTGTCTTCTACTCGTTTCCTTGCTTCAAGTTCTGATATGTTTGGAATTCGGACAGATTCCTCGTACCATTGTGTTGGTGTTAGAGTTGGCAATTCTGCTTCTAAAATGGTTATTCAATGCATGTCTTCTGTCACAGATGTTCCTAGTGTTTCTGAGACAAAGCTAAATTTCCTAAAGGCATATAAACGACCAATCCCGAGTATCTATAACAATGTGCTGCAGGAGCTCATTGTTCAACATCATTTAATGAGATACAAGACATCATACCAATATGATTCTGTATTTGCTCTTGGTTTTGTCACTGTCTATGATAAACTCATGGAAGGGTATTCTAGTGAAGAGGAGCGTGATACCATCTTCAAAGCTTATATTAATGCATTGAAGGAAGATCCAGAACAATACAGAATAGATGCAAAGAAGTTGGAAGATTGGGCTAAGGCTCAAAACTCAATTTCACTGGTTGAGTTTTCATCCAGAGAAGGAGAAGTTGAAGGGGTTTTAAAGGATATTGCAAAAAGAGCAGGAGAAAAGGGTGAATTCAGTTATAGTCGTTTCTTTGCAGTAGGTCTTTTTCGCCTTCTTGAGTTGGCAAATGCAACAGAACCAACAATTTTAGACAAGCTTTGTGCGGCTTTGAACATCGACAAAAGAAGCGTTGATCGGGACTTGGATGTGTACCGTATGCTGCTTTCCAAGCTGGTTCAAGCAAAAGAGCTGCAAAGGGAATTTATTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGGTGGAGCCACAGAAGGCTAATGGGGCCATTACAAATTGA 864 0.3981 MAALTSLSFSATSQCSQRKSTLSSTRFLASSSDMFGIRTDSSYHCVGVRVGNSASKMVIQCMSSVTDVPSVSETKLNFLKAYKRPIPSIYNNVLQELIVQHHLMRYKTSYQYDSVFALGFVTVYDKLMEGYSSEEERDTIFKAYINALKEDPEQYRIDAKKLEDWAKAQNSISLVEFSSREGEVEGVLKDIAKRAGEKGEFSYSRFFAVGLFRLLELANATEPTILDKLCAALNIDKRSVDRDLDVYRMLLSKLVQAKELQREFIDREKKKREERVEPQKANGAITN* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3037 287 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 287 IPR017499 GO:0010207|GO:0015979
Mtr2g3037 287 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 67 272 IPR017499 GO:0010207|GO:0015979
Mtr2g3037 287 Hamap Protein Thf1 [thf1]. 65 273 IPR017499 GO:0010207|GO:0015979
Mtr2g3037 287 Pfam Thylakoid formation protein 71 275 IPR017499 GO:0010207|GO:0015979
Mtr2g3037 287 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3037 Mtr-Chr2 44077779 44081085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3037 - - gmx:100796767 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3037 2 44077779 44081085 Mtr2g3037 2 44077779 44081085 ECH
Mtr2g3037 2 44077779 44081085 Mtr4g1318 4 22360398 22365400 PCT