Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1300 ATGAGTCGCTACGATCCAAACCCTTTCGAAGAAGAAGAGACTCATGTCAATCCTTTTGCGGACGGAACAGCTAAAGGAAAAGGGTCAGGACAATCCAGTTATGGTGGAGGTGCATTCTACACTACTAACCCTGGAAGTGTTCCTTCTGCAGCCTCAAGACTCTCACCCCTTCCTCATGAGCCTTATGATCGTAATGCAACTGTTGACATCCCTCTCGATAGCTCAAAGGATGTCAAAGCAAAGGAGAAGGAACTTCAAGCTCGAGAGTCTGAATTGAAAAAAAGGGAACAGGAACTAAAACGAAGAGAGGACGCCATTGCACGAGCTGGTATAGTTATAGAGGAAAAAAACTGGCCACCTTTTTTCCCCATCATTCATCATGACATTGGAACTGAAATACCAATTCATCTTCAAAGGATGCAGTATATTGCATTTTCAACATGGTTAGGTTTGGTTCTGTGTCTTCTGTGGAATATAGTGGCAGTTACCACTGCTTGGATCAAAGGAGAAGGTCCAACCATCTGGTTTCTTGCTATTATATATTTTATTTCTGGTGTTCCAGCATCCTATGTGATGTGGTATCGCCCTCTTTATCGCGCTATGAGGACGGACAGTGCTCTGAAGTTTGGCTGGTTTTTTGTCTCTTACATGTTGCACATTGCTTTTTGCATTTTCGCTGCAGTTGCCCCACCAATTATCTTCAAAGGAAAATCTCTCACAGGTATTTTGGCTGCGATTGATGTGATAGGCGGCAGTGCATTGGTTGGGATATTCTACTTCATTGGGTTCGGATTTTTCTGTATCGAGTCACTGATGAGCGTCTGGGTTTTTCAGCAAGTATTGATGTACTTCCGTGGAAGCGGCAAGGCTGCAGAGCTGAAGCGAGAGGCAGCCAGAGGAACGATGATGGCAGCTCTATGA 921 0.4452 MSRYDPNPFEEEETHVNPFADGTAKGKGSGQSSYGGGAFYTTNPGSVPSAASRLSPLPHEPYDRNATVDIPLDSSKDVKAKEKELQARESELKKREQELKRREDAIARAGIVIEEKNWPPFFPIIHHDIGTEIPIHLQRMQYIAFSTWLGLVLCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPASYVMWYRPLYRAMRTDSALKFGWFFVSYMLHIAFCIFAAVAPPIIFKGKSLTGILAAIDVIGGSALVGIFYFIGFGFFCIESLMSVWVFQQVLMYFRGSGKAAELKREAARGTMMAAL* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1300 306 Coils Coil 75 105 - -
Mtr4g1300 306 MobiDBLite consensus disorder prediction 1 73 - -
Mtr4g1300 306 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 306 IPR007273 GO:0015031|GO:0016021
Mtr4g1300 306 MobiDBLite consensus disorder prediction 26 50 - -
Mtr4g1300 306 Pfam SCAMP family 115 286 IPR007273 GO:0015031|GO:0016021
Mtr4g1300 306 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 306 - -
Mtr4g1300 306 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1300 Mtr-Chr4 22154100 22162502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1300 68 306 Miscellaneous Gene Families AT2G20840 82.427 6.34e-141 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1300 K19995 - gmx:100796729 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3062 2 44285461 44291613 Mtr4g1300 4 22154100 22162502 PCT