Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3062 ATGACAATGAGTAACTTCGAAACCAATCCCTTCGCCGAAGAAGAAGTTAATCCTTTCGCGGATGGATCTACTAAAGGAAAAGCTTCAGGGCAATCAAATTATGGTGGAGGTGCATTCTACACTACTAACCCAGGAAGTGTTTCCTCTGTAACCTCATCAAGGCTCACACCCCTTCCTCACGAGCCTCACGATCGTGGGGTGACTGTTGACATTCCTCTTGAACTCCCAAAGGACCTCAAAGCAAAGGAGAAAGAACTTCAAGCTAGAGAGGCTGAATTGAAAAGAAGGGAACAGGAGCTACAAAGAAAGGAAAGTGCTATAAAAAAAGCTGGAATAGTTATAGAGGAAAATAATTGGCCACCTTTTTTCCCTCTCATTCATCATGACATTGGAAATGAAATACCAATACATCTGCAAACGATCCAGTATGTTGCGTTTACAACATGGTTAGGTTTGATTTTCTGTCTTTTATATAATATTGCGGCTGTTACAGTAGCTTGGCTCAAAGGAGAAGGTATATCAATATGGTTTCTTTCAATTATATACCTCATTTCCGGTGTACCAGGAGCCTATGTGATGTGGTATCGCCCTCTATATCGTGCTACGAGGACGGACAGTGCTCTAAAATTTGGCTGGTTTTTCTTATGCTACTCGTTCCACATTATGTTTTGCGTTTTGGCCGCAGTTGCACCTCCAATTATCTTCAAAGGAAAATCTCTCGCGGGTATACTGCCTGCAATTGAGATCATGACTTACAATCCAGTAGTTGGGATACTCTACTTTGTTGGTTTTGCTTTTTTCGCCATCGAAACATTACTGAGCATCTGGGTTATTCAGCAAGTATACATGTACTTCCGCGGCAGTGGGAAGGCGGCACAAATGAAACGTGAAGCTGCAAGGGGGGCCATGATGACAGCTCTATGA 924 0.4275 MTMSNFETNPFAEEEVNPFADGSTKGKASGQSNYGGGAFYTTNPGSVSSVTSSRLTPLPHEPHDRGVTVDIPLELPKDLKAKEKELQAREAELKRREQELQRKESAIKKAGIVIEENNWPPFFPLIHHDIGNEIPIHLQTIQYVAFTTWLGLIFCLLYNIAAVTVAWLKGEGISIWFLSIIYLISGVPGAYVMWYRPLYRATRTDSALKFGWFFLCYSFHIMFCVLAAVAPPIIFKGKSLAGILPAIEIMTYNPVVGILYFVGFAFFAIETLLSIWVIQQVYMYFRGSGKAAQMKREAARGAMMTAL* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3062 307 Pfam SCAMP family 116 287 IPR007273 GO:0015031|GO:0016021
Mtr2g3062 307 MobiDBLite consensus disorder prediction 1 67 - -
Mtr2g3062 307 MobiDBLite consensus disorder prediction 24 56 - -
Mtr2g3062 307 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 3 307 - -
Mtr2g3062 307 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 3 307 IPR007273 GO:0015031|GO:0016021
Mtr2g3062 307 Coils Coil 79 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3062 Mtr-Chr2 44285461 44291613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3062 69 307 Miscellaneous Gene Families AT2G20840 77.824 3.29e-131 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3062 K19995 - pop:7497391 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3062 2 44285461 44291613 Mtr2g3062 2 44285461 44291613 ECH
Mtr2g3062 2 44285461 44291613 Mtr4g1300 4 22154100 22162502 PCT