Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0268 ATGAATATGGAGCTTATTTCTGGTTTACCCGAAGATGTGGCCCGAGACTGTTTAATTCGGGTTTCATACCAACAGTTTCCAACGGTGGCTTCAGTTTGTAAAGGGTGGAAGACGGAGATACATACGGTGGAGTACCATCGTCAACGGCGGAGAACCGGTAACAGTCAAAAAGTTCTTGTGATGGTTCAAGCACGGATTGAACCGAATAAAACTGAAACCGGTTCAACAAAAAGACTTGTAAACCCGGTTTACCGGTTGAGTGTGTTTGAACCGGAAACGGGTTTTTGGAGTGAGTTACCGGCACCACCCGGTTATAATTCCGGTTTACCGGTTATGTGTCAGGTAGCATGTGTTGGTTATGATCTTGTTGTGTTGGGAGGTTTGGATCCGGAAACATGGAAAGCATCGAATTCTGTGTTTGTTTATAATTTTTTGTCGGCCAAGTGGCGTTGTGGGACCCAAATGCCAGGTGGACCTCGTACGTTTTTTGGATGTTCGTCAGATGACCGCCAAACAATTTTTGTAGCTGGCGGTCATGATGACGAGAAAAACGCATTGAGGTCCGCTTTGGCGTATGATGTGGTGGCGGATGTGTGGGTTCAGTTGCCAGAGATGTCGTCGGAGAGAGACGAGTGTAAGGCGGTGTTCCGTGGCGGGAGGTTTATAGTTGTTGGTGGTTACACGACGGAGAATCAAGGGAGGTTTGAGAGGAGTGCGGAGGCGTTTGATTTTGTGACGTGGAAGTGGGGTCAAGTGGAGGAAGAGTATTTGGATTGTGCCACGTGTCCTATGACTTTGGTGGACGGTGGTGATGAGGAGGAGAGTGTTTATATGTGTTGCAATGGTGAATTGGTTATGATGAGGGCTCACACGTGGCAGAAGATGGGTAGGGTTCCAGATGAGATATGCAACGTGGCGTATGTTGGAGCGTTCGATGGTTTTGTGGTTGTGATTGGATCAAGTGGCTATGGTGAAGTGCATATGGGTTATGTTTTTGATGTAAATAATAATAATTGGAGAAAATTGGATTGTCCAGATGGGTTTAAGGGACATGTCCAAACTGGTTGTGTTTTAGAAATTTAG 1083 0.4626 MNMELISGLPEDVARDCLIRVSYQQFPTVASVCKGWKTEIHTVEYHRQRRRTGNSQKVLVMVQARIEPNKTETGSTKRLVNPVYRLSVFEPETGFWSELPAPPGYNSGLPVMCQVACVGYDLVVLGGLDPETWKASNSVFVYNFLSAKWRCGTQMPGGPRTFFGCSSDDRQTIFVAGGHDDEKNALRSALAYDVVADVWVQLPEMSSERDECKAVFRGGRFIVVGGYTTENQGRFERSAEAFDFVTWKWGQVEEEYLDCATCPMTLVDGGDEEESVYMCCNGELVMMRAHTWQKMGRVPDEICNVAYVGAFDGFVVVIGSSGYGEVHMGYVFDVNNNNWRKLDCPDGFKGHVQTGCVLEI* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0268 360 Gene3D - 45 346 IPR015915 GO:0005515
Mtr4g0268 360 Pfam Kelch motif 172 206 IPR006652 GO:0005515
Mtr4g0268 360 Pfam Kelch motif 113 156 IPR006652 GO:0005515
Mtr4g0268 360 SUPERFAMILY Kelch motif 83 342 IPR015915 GO:0005515
Mtr4g0268 360 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 3 360 - -
Mtr4g0268 360 PANTHER OS02G0208700 PROTEIN 3 360 IPR044595 GO:0080037|GO:2000762
Mtr4g0268 360 Pfam F-box domain 6 38 IPR001810 GO:0005515
Mtr4g0268 360 SMART kelc_smart 121 169 IPR006652 GO:0005515
Mtr4g0268 360 SMART kelc_smart 172 219 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0268 Mtr-Chr4 3248660 3250508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0268 - - ccaj:109808365 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0268 4 3248660 3250508 Mtr4g0268 4 3248660 3250508 ECH
Mtr2g3624 2 50192923 50194456 Mtr4g0268 4 3248660 3250508 PCT