Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3624 ATGGAGTTGATTTCATGTTTACCAGAAGACATAGCACGAGAGTGTTTGGTTCGAGTTTCATATCAAGAATTTCCGGCAGTTGCCACCGTGAGCAAAGGGTGGCAAACGGAAATTCAGACGCCGGAGTTTCGCCGTGTACGGAGGAGTACAGGTCATGCTCAGAAAATCCTAGTCACGGTTCAGTCCAAATTTGATTCTGAAAAAAGCAAAACCGGTTTATTGGCTAAAGCTACAGCGAACCCGGTTTATAACTTGAATGTATTGGAAACTGAAACGGGTATATGGAGCGAGTTGCCAATGGGACCCGAATTATGTGAAGGGTTACCCTTGTTTTGTCAGATTGCGGGTGTCGGGTATGATCTAGTTGTTATGGGTGGGTGGGACCCTGATTCATGGAAAGCTTCAAATTCGGTGTTTATTTATAGTTTTTTATCTGCTAAGTGGCGCCGCGGGGCCGATATGCCTGGTGGGCCCCGCACATTTTTCTCTTGTGCATCAGATCATGAAAGAATGGTCTATGTGGCGGGAGGACACGATGAGGAGAAGAATGCATTGAAGTCAGCATTTGCGTATGATGTGGTAGATGACATGTGGATCCCGCTTCCTGATATGGCGAGGGAGCGCGATGAGTGTAAGGTTGTGTTTTGTGCCAAAGACAATGGCTCTGGCACAATCAAAGTTGTTGGTGGATATCGTACGGAGATGCAAGGGCGATTTGAACGTAGTGCAGAGGAGTTTGGTGTAGCCACGTGGCGGTGGGGTCCAGTCGAGGAGGAGTTCTTAGATGATGCCACATGTCCAAGGACTTGTGTTGATGGTTGTGATTTGGAGAGAAAAATGTACATGTGTAAGGGTGATGATGTGGTGGCATTGGATGGTGAGACATGGCAGGTGGTGGCCAAGGTACCTAGAGAGATAAGAAATGTTGCTTGTGTGGGAGCTTGGGTAGATGCATTGTTATTGATTGGGTCTAGTGGGTTTGGAGAACCTTATATGAGCTTTGTGTTGGACCTAAAGAGTGGTGTTTGGAGTAAACTTGAAAACCCAGAAAATTTCACTGGCCACGTTCAATCTGGCTGCCTTTTGGAGATTTAA 1095 0.4658 MELISCLPEDIARECLVRVSYQEFPAVATVSKGWQTEIQTPEFRRVRRSTGHAQKILVTVQSKFDSEKSKTGLLAKATANPVYNLNVLETETGIWSELPMGPELCEGLPLFCQIAGVGYDLVVMGGWDPDSWKASNSVFIYSFLSAKWRRGADMPGGPRTFFSCASDHERMVYVAGGHDEEKNALKSAFAYDVVDDMWIPLPDMARERDECKVVFCAKDNGSGTIKVVGGYRTEMQGRFERSAEEFGVATWRWGPVEEEFLDDATCPRTCVDGCDLERKMYMCKGDDVVALDGETWQVVAKVPREIRNVACVGAWVDALLLIGSSGFGEPYMSFVLDLKSGVWSKLENPENFTGHVQSGCLLEI* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3624 364 Pfam Kelch motif 171 204 IPR006652 GO:0005515
Mtr2g3624 364 SUPERFAMILY F-box domain 3 46 IPR036047 GO:0005515
Mtr2g3624 364 SUPERFAMILY Kelch motif 80 346 IPR015915 GO:0005515
Mtr2g3624 364 Pfam F-box domain 4 36 IPR001810 GO:0005515
Mtr2g3624 364 Pfam Kelch motif 109 159 - -
Mtr2g3624 364 Gene3D - 44 358 IPR015915 GO:0005515
Mtr2g3624 364 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 364 - -
Mtr2g3624 364 SMART kelc_smart 120 168 IPR006652 GO:0005515
Mtr2g3624 364 SMART kelc_smart 171 218 IPR006652 GO:0005515
Mtr2g3624 364 PANTHER OS02G0208700 PROTEIN 1 364 IPR044595 GO:0080037|GO:2000762
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3624 Mtr-Chr2 50192923 50194456 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3624 - - gmx:100786398 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3624 2 50192923 50194456 Mtr2g3624 2 50192923 50194456 ECH
Mtr2g3624 2 50192923 50194456 Mtr4g0268 4 3248660 3250508 PCT