Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0227 ATGAAGGCCATGGAAGCTTTACACTTACGGTGTATACTTCCACTATCCAGAACCAAAAACTCTCTCTTTACACTTCAAACAACAACCCCATTTTCTCTATCACCATTTTCAAAACCCCCACCATTAACTTTAACCTTATCATCTTCATCTTCTCAAAATGCTACTATAAGAACAAGAGCAGGGTTTTTTTTTGGTCGTACAAAAGATGATAAGAAGAAGAAGAAGATGGATTTGCCTGATACTGTTAAAGCTGGTGACCCTGTTCTTCATGAACCTGCTCAAGAAGTTGATCCTAGTGAGATAATGTCTGATAAAGTGCAGAAAATTATTGATGATATGATTAGGGTTATGAGGAAAGCTCCTGGTGTTGGTTTAGCTGCTCCTCAGATTGGAGTTTCTTCTAGGATAATTGTTTTGGAAGACACCGAAGAATTTATTAGTTATGCCCCAAAGGAAGTGCTCAAAGCTCAAGATAGACATCCTTTTGATCTTTTGGTGATCCTGAATCCCAAGCTGAAGAGTACGAGCAAAAGGACTGCCCTGTTTTTTGAAGGGTGTTTGAGTGTTGATGGATTTAGAGCTGTGGTGGAACGTCACCTTGACGTTGAAGTTACAGGTTTGGATCGCAATGGTGAACCAATCAAAATAACTGCTTCTGGTTGGCAGGCCCGGATTTTACAACATGAATGTGATCACTTGGATGGAACTCTATATGTTGATAAGATGGTACCTAGAACTTTCAGAACGGTAGAAAACATGGACCTGCCTCTTGCTCAGGGATGCCCGAATCTTGGCCCTCGGTAG 804 0.4092 MKAMEALHLRCILPLSRTKNSLFTLQTTTPFSLSPFSKPPPLTLTLSSSSSQNATIRTRAGFFFGRTKDDKKKKKMDLPDTVKAGDPVLHEPAQEVDPSEIMSDKVQKIIDDMIRVMRKAPGVGLAAPQIGVSSRIIVLEDTEEFISYAPKEVLKAQDRHPFDLLVILNPKLKSTSKRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRNGEPIKITASGWQARILQHECDHLDGTLYVDKMVPRTFRTVENMDLPLAQGCPNLGPR* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0227 267 CDD Pep_deformylase 82 238 IPR023635 GO:0042586
Mtr4g0227 267 SUPERFAMILY Peptide deformylase 74 250 IPR036821 -
Mtr4g0227 267 Pfam Polypeptide deformylase 82 245 IPR023635 GO:0042586
Mtr4g0227 267 Hamap Peptide deformylase [def]. 77 253 IPR023635 GO:0042586
Mtr4g0227 267 Gene3D Peptide deformylase 76 266 IPR036821 -
Mtr4g0227 267 PRINTS Peptide deformylase signature 111 140 IPR023635 GO:0042586
Mtr4g0227 267 PRINTS Peptide deformylase signature 184 195 IPR023635 GO:0042586
Mtr4g0227 267 PRINTS Peptide deformylase signature 196 214 IPR023635 GO:0042586
Mtr4g0227 267 PRINTS Peptide deformylase signature 215 244 IPR023635 GO:0042586
Mtr4g0227 267 PANTHER PEPTIDE DEFORMYLASE 43 266 - -
Mtr4g0227 267 PANTHER PEPTIDE DEFORMYLASE 43 266 IPR023635 GO:0042586
Mtr4g0227 267 TIGRFAM pept_deformyl: peptide deformylase 82 245 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0227 Mtr-Chr4 2733176 2737433 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0227 K01462 - gmx:100784292 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0227 4 2733176 2737433 Mtr4g0227 4 2733176 2737433 ECH
Mtr2g3668 2 50786490 50790682 Mtr4g0227 4 2733176 2737433 PCT