Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3668 ATGGAAGCAGCACGGCGGCTGGTGTGGCGTTTACGTGCTTTTCCGATGCCGGTGCTCTCAAACGGTGTCGTATCACTCTCTTCATCTTCTAGTTGTAACAACAAAATTCAACTATCAAGTACCAAATTTTCGAAGTTCGGTTCAACATTATCATCACCTTCTTCAGAAACAGCATTACTAAGGAAAACTGTGAATAAATTGCCTTACATTGTAAAAGCAGGTGATCCAGTTATTCATGAGCCTGCACGTGAGGTTGATCACAGTGAGATTAAATCAGACAAGATTCAGAATATTATTGATGATATGATTCTTGTCATGAGAAAAGCCCCTGGAGTAGGTGTTGCTGCCCCACAAATTGGTATCCCCTTAAGGATAATAGTTTTGGAGGATAAAGAAGAATTTATTTGTTACAACACAGAGGAGGAGACCAAAGCACAAGACAGAAGACCTTTTGATCTTTTGGTGATTCTGAATCCCAAATTAAAGAACAAGAGCAACAGGACTGCCTTCTTTTTTGAAGGGTGCTTGAGTGTTGATCGATTTCAAGCTTTGGTAGAGCGGTACCTTGATGTTGAGGTTACAGGTTTTGATCGATATGGTGAGCCAATCAAAATCAATGCTTCTGGTTGGCAGGCTCGGATTTTACAGCATGAGTGCGATCACCTAGATGGAACACTATATGTCGATAAGATGGTACCTAGAACTTTCAGAAGTTGGAAAAACGTGGATCTCCCTCTTGCCCGTGGGTGCCCTAAACTTGGCCCCCGAGCGTAA 774 0.4225 MEAARRLVWRLRAFPMPVLSNGVVSLSSSSSCNNKIQLSSTKFSKFGSTLSSPSSETALLRKTVNKLPYIVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRIIVLEDKEEFICYNTEEETKAQDRRPFDLLVILNPKLKNKSNRTAFFFEGCLSVDRFQALVERYLDVEVTGFDRYGEPIKINASGWQARILQHECDHLDGTLYVDKMVPRTFRSWKNVDLPLARGCPKLGPRA* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3668 257 Hamap Peptide deformylase [def]. 66 242 IPR023635 GO:0042586
Mtr2g3668 257 TIGRFAM pept_deformyl: peptide deformylase 70 234 IPR023635 GO:0042586
Mtr2g3668 257 SUPERFAMILY Peptide deformylase 66 239 IPR036821 -
Mtr2g3668 257 CDD Pep_deformylase 70 227 IPR023635 GO:0042586
Mtr2g3668 257 PRINTS Peptide deformylase signature 100 129 IPR023635 GO:0042586
Mtr2g3668 257 PRINTS Peptide deformylase signature 173 184 IPR023635 GO:0042586
Mtr2g3668 257 PRINTS Peptide deformylase signature 185 203 IPR023635 GO:0042586
Mtr2g3668 257 PRINTS Peptide deformylase signature 204 233 IPR023635 GO:0042586
Mtr2g3668 257 Pfam Polypeptide deformylase 70 234 IPR023635 GO:0042586
Mtr2g3668 257 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Mtr2g3668 257 PANTHER PEPTIDE DEFORMYLASE 25 256 IPR023635 GO:0042586
Mtr2g3668 257 Gene3D Peptide deformylase 66 256 IPR036821 -
Mtr2g3668 257 PANTHER PEPTIDE DEFORMYLASE 25 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3668 Mtr-Chr2 50786490 50790682 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3668 K01462 - zju:107408292 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3668 2 50786490 50790682 Mtr2g3668 2 50786490 50790682 ECH
Mtr2g3668 2 50786490 50790682 Mtr4g0227 4 2733176 2737433 PCT