LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr4g0181	ATGGATTCCAATAATTGGGTCCCTAATCAGGGTACGGAAGCCACTGCCGACACAGTTGATTGGAGAACTCAACTGCAACCTGATCAACGCCAAAGAATTGTCAATAAAATAATGGACACATTAAGAAAACATCTTCCCGTTTCTGGTTCTGAGGGATTGCTTGAACTTCGGAAGATTGCTCAAAGGTTTGAAGATAAGATTTATACTGCTGCGACAAGCCAGTCTGATTATCTACGAAAAATATCTATGAAAATGCTAACAATGGAGAATAAATCTCAAAACACCATGGCCAACAATATGCTATCAAATGAAGGTGGTCCCAGCAATAATCTGCCCGATCAAGGACAACAACATCCTAATCCTCTGCCTAATCAGCACCAACCTCGTCAGCAGCTTCTATCTCACAACATTCAAAATAATGTTGCACCTCAACCTAACCTTTCATCGGTATCAACTCTACCCCAGATTCCCAGCCAGAATATTAGCCAAAATTCGAACACTCAACAACCTGGGCAAAATTCTGTGAGTAACTCTATTGGCCAGAATTCCAATGTACAGAGTATGTTTCCTGGTTCTCAGAGGCAAATGTCAGGAAGGCCGCAAGTTGTTCCCCAACAGCAACAGCAACAATCACAAAATCAACAACAGACTCTTTACCAACAGCAGCTTCTGAAGCATAAGCTGTCTCAGATGCAGCAGCAGCAGCAACAGCAGAACCTTCTGCAACCAAATCAGCTGCTATCTTCTCAACAATCTGTTATACCAACATCATCGGCTATGCAGCCTTCAATGGTGCAATCATCTCTATCTAGCCTTCCACAGAATCAGCAGTCTAATAATGTTCAACAGTCAACACAGTCTAGACTTCAGCAACATTCCCAAATTATTAGGCAGCAGCAACAGAATTCTATTGTTAATCAGCAACAAACACCAATGATTCAACAGCAACATCAGCAGCTTGCGGGGCCTCAGTCAAATGCAACGAATGGCCAACATGCTCAGATGCTTGGACAACAGAACAATGTTGGTGACGTACAGAAATCCCAGAGGTTGCATCCACAGCAGAATAATCTCATGAATCTGCAACAGCGACAGCAACAACAACAGTTAATGAATCATCAAAACAATCTAACAAATATACATCAACAGCCAGGAAATAATGTACAGGGGTTACAACAGCAACAGCAGTTTGGAACTGAGTCTGGCAACCAAGGCATCCAAACAAGCCATCATTCTGCACAGATGCTGCAACAACCAAAGGTTTCAATGCAGCAACAATTGCAACACAATCCATCAAAATTGTTGCCATCTCAGTCGCAGCAGTCCCAGACACAGGCTTCTCAGCAGCAATTGATGTCGCAGATTCATAACCAGCCTGCACAGATGCAACAGCAACTGGGGTTGCAGCAGCAGCAAAATCCTTTGCAACGAGATATGCAGCAAAAACTCCAAGCATCAGGGTCCTTACTTCAACAGCAAAGTGTTCTTGATCAGCAAAAACAACTATATCAATCTCAAAGAGCTCTTCCAGAAACATCAACAACTTCTGTGGATTCTACAACGCAGACTGCACAACCAAATGGGGTCGATTGGCAAGAAGAAATTTACCAAAAGCTGCAAACCATGAAAGAAACTTACTTGCCAGAGATTAATGAAATATACCAGAAAATTTCTATGAAAGTTCATCAGTTTGATTCTATTCCTCAACAACCAAAGTCAGATCAGATTGAAAAGTTGAAGGGATATAAAACAATGTTCGAACGCATGATATCAATTCTACAGATTCCCAAGAGCAGTATTCAGTACGGTGTAAAGGAAAAATTGGGATCATATGAAAAGCAGATTGCAGCTGCCATAAATCAATTTAGACCTAGGAAAGCCATGTCTTCACTGCAACCAGGACAGCTTCCTGCAACTCATATGGCTTTGATGCCACAGTCACAATCTCAAGTTACTTCAGTACAGTCTCATGAAAATCAAATGAACTCTCAGATGCAGCCTACAAATTTACAAGGTTCTACCTCCGTTCAGCAGAACAATATTGCGAGCTTGCAGAACAATTCTATGTCTAGTTTATCAACAACACAGCAGAATATGTTGAATACAATTCAACCAAGTAATAATTTAGATTCTGGGCAAGGAAATTCTGTGAACTCTTTGCAACAGGTTCCAGTGAGCTCCCTTCAACAAAACACTGTTAATACCCAACATACCAACATCAATTCATTACCGTCACAAGGTGGGGTAAATGTAATCCAACCAAATCTAAATACCCATCAGCCAGGTTCCAATATGCTTCAGCAGCAACAACTGAAACATCAGCAGGAACAGAAGATGCTGCAGAATCAACAGTTCAAACAACAATATCAGCAGCGACAAATGATGCAGAGGCAGCAGCAGCAGCTACACCAGCCAGCAAAGCAACAGATGTCTGCACAACCACAGACACATCAATTGCCCCAGATTAATCAAATGAATGATATGAATGATGTGAAAATACGACAAGGATTGGGTGTTAAGTCAGGGGTATTTCAGCAACATCTTACCTCAGGTCAAAACTCAACTTATTCCCATCAACAGATGAAACAAGGGAGTCCATTTCAGGTTTCTTCACCCCAACTCTTTCAAGCTGCATCTCCTCAAATTCCACATAATTCATCTCCCCAAGTTGACCAACAAACTCATCTCCTGTCTCTAACAAAAGTTGGAACTCCTCTGCAATCTTCTAATTCACCATTTGGGGTCCCTACTCCTTCACCTCCCATGGCTCCATCTCCTATGCTAGTAGACTCTGAGAAGCCCATTCCTGGTGTTTCATCATCAAATGCTGCCAATGTTGGACAGAATGCAGCAGCACCAGCTCAATCCCTTGCCATTGGGACTCCTGGGATATCAGCCTCTCCTTTATTGGCAGAATTCAGTGGTCCAGATGGTACGTTTTGTAATGCTTTAGGAGCTCCTTCTGGGAAGTCGACTGCAGATCACCCTATTGATCGTCTAATTAGAGCGGTGCAATCAATGTCTACTGAGACATTAACTGCTGCTGTCAGTGATATTAGTTCAGTTGTTAGCATGAGTGATAGGATATCAGGATCAGCTCCAGGTAATGGATCCAGAGCTGCTGTTGGTGAGGATTTGGTTTCCATGACTAATTGTCGTCTTCAGGCTAGAAGTTTTATTACTCAAGATGGTGGTACTACTAATGGAATCAGGAAGTTTAAGCGCCACATCCGTGGTAAAACGTTGGATGTTGGGTCATCTGCTGGAAGCATGAATGACAATCTTAAGCAGTTATCTGCTTCAGAGGCTTCTCAGCAGGAGTCAACTGCAACGTCTAATGTCAAGAAGCCAAAGGCTGAGGTTAATCATGCCCTTTTGGAAGAATTACAGCAAATTAATCGCCGACTTATTGACACAATAGTAGACATAAGTACTGAAGATGTTGATTCAACTGCAGCAGCTGCTGCTGCTGCTGAATGGGTACATGGGACCATTGTCAAATGTTCTTTCATTCCTGTGTCTCTCAGCCCATCTTTAAAATCTCAATATGTTTCACTACAGTCACCTATTCAGCCTTTGCGCCTGCTGGTTCCTCCAAACTATCCTAACTGCTCTCCCATATTCATAGACAAGTTTCCAGTTGAATCCCGTAAGGGGAATGAAGATCTTTCAGAGAAAGCAAAAGTGAAGTTTAGCATGTCCTTACGTAATTTATCACAACCTATGTCCCTCAAGGATATAGCAATGACTTGGGATGCTTCTGTTCGCGGTGTTATTTCCGAGTATGCACAACAATTTGGTGGAGGAACATTCAGCGCTAAGTATGGAGATTGGCAGGAGTTCACGTCTTGGGAGGATTTGTTGGCTGCATAA	3873	0.424	MDSNNWVPNQGTEATADTVDWRTQLQPDQRQRIVNKIMDTLRKHLPVSGSEGLLELRKIAQRFEDKIYTAATSQSDYLRKISMKMLTMENKSQNTMANNMLSNEGGPSNNLPDQGQQHPNPLPNQHQPRQQLLSHNIQNNVAPQPNLSSVSTLPQIPSQNISQNSNTQQPGQNSVSNSIGQNSNVQSMFPGSQRQMSGRPQVVPQQQQQQSQNQQQTLYQQQLLKHKLSQMQQQQQQQNLLQPNQLLSSQQSVIPTSSAMQPSMVQSSLSSLPQNQQSNNVQQSTQSRLQQHSQIIRQQQQNSIVNQQQTPMIQQQHQQLAGPQSNATNGQHAQMLGQQNNVGDVQKSQRLHPQQNNLMNLQQRQQQQQLMNHQNNLTNIHQQPGNNVQGLQQQQQFGTESGNQGIQTSHHSAQMLQQPKVSMQQQLQHNPSKLLPSQSQQSQTQASQQQLMSQIHNQPAQMQQQLGLQQQQNPLQRDMQQKLQASGSLLQQQSVLDQQKQLYQSQRALPETSTTSVDSTTQTAQPNGVDWQEEIYQKLQTMKETYLPEINEIYQKISMKVHQFDSIPQQPKSDQIEKLKGYKTMFERMISILQIPKSSIQYGVKEKLGSYEKQIAAAINQFRPRKAMSSLQPGQLPATHMALMPQSQSQVTSVQSHENQMNSQMQPTNLQGSTSVQQNNIASLQNNSMSSLSTTQQNMLNTIQPSNNLDSGQGNSVNSLQQVPVSSLQQNTVNTQHTNINSLPSQGGVNVIQPNLNTHQPGSNMLQQQQLKHQQEQKMLQNQQFKQQYQQRQMMQRQQQQLHQPAKQQMSAQPQTHQLPQINQMNDMNDVKIRQGLGVKSGVFQQHLTSGQNSTYSHQQMKQGSPFQVSSPQLFQAASPQIPHNSSPQVDQQTHLLSLTKVGTPLQSSNSPFGVPTPSPPMAPSPMLVDSEKPIPGVSSSNAANVGQNAAAPAQSLAIGTPGISASPLLAEFSGPDGTFCNALGAPSGKSTADHPIDRLIRAVQSMSTETLTAAVSDISSVVSMSDRISGSAPGNGSRAAVGEDLVSMTNCRLQARSFITQDGGTTNGIRKFKRHIRGKTLDVGSSAGSMNDNLKQLSASEASQQESTATSNVKKPKAEVNHALLEELQQINRRLIDTIVDISTEDVDSTAAAAAAAEWVHGTIVKCSFIPVSLSPSLKSQYVSLQSPIQPLRLLVPPNYPNCSPIFIDKFPVESRKGNEDLSEKAKVKFSMSLRNLSQPMSLKDIAMTWDASVRGVISEYAQQFGGGTFSAKYGDWQEFTSWEDLLAA*	1291

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr4g0181	1290	Coils	Coil	363	383	-	-
	Mtr4g0181	1290	Pfam	KIX domain	19	98	IPR036546	-
	Mtr4g0181	1290	Coils	Coil	1126	1146	-	-
	Mtr4g0181	1290	MobiDBLite	consensus disorder prediction	644	675	-	-
	Mtr4g0181	1290	MobiDBLite	consensus disorder prediction	378	484	-	-
	Mtr4g0181	1290	SUPERFAMILY	Kix domain of CBP (creb binding protein)	19	94	IPR036529	GO:0003712\|GO:0006355
	Mtr4g0181	1290	PANTHER	OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED	827	1290	-	-
	Mtr4g0181	1290	PANTHER	OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED	1	727	-	-
	Mtr4g0181	1290	Gene3D	Coactivator CBP, KIX domain	19	99	IPR036529	GO:0003712\|GO:0006355
	Mtr4g0181	1290	MobiDBLite	consensus disorder prediction	140	214	-	-
	Mtr4g0181	1290	MobiDBLite	consensus disorder prediction	255	330	-	-
	Mtr4g0181	1290	MobiDBLite	consensus disorder prediction	506	526	-	-
	Mtr4g0181	1290	MobiDBLite	consensus disorder prediction	97	128	-	-
	Mtr4g0181	1290	PANTHER	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED	1	727	IPR044661	GO:0003713\|GO:0031490
	Mtr4g0181	1290	PANTHER	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED	827	1290	IPR044661	GO:0003713\|GO:0031490

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr4g0181	Mtr-Chr4	2174139	2185328	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr4g0181	K14972		-	gmx:100805336	1355.89

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr2g3718	2	51220829	51230748	Mtr4g0181	4	2174139	2185328	PCT