Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3718 ATGGATACCAATAATTGGAGACCTAATCAAGGTGCTGAACCGAATATGGATACTAGTGATTGGAGAGGTCAATTGCAGCCTGAATCACGCCAAAGAATTGTCAACAAAATTATGGACACATTAAAAAGGCATCTTCCTGTTTCTGGTCAAGAAGGATTGCATGAACTTCGGAAGATTGCCCAAAGGTTTGAAGAGAAGATTTATACTGCTGCAACAAGCCAGTCTGATTATCTACGGAAAATATCTTTGAAGATGCTTACGATGGAGACTAAATCCCAGGGCACTATATCCAACAATATACCGCCGAATCAAGTTGGCCCTAGCAATCAACCTCCTGACCCAGGACTTGGTATTCAGTCTCAAGTTCTCAATCAAGGGCAGCAACATCCTATTCCTTTGCCCAATCAGCCCCAGTCACGTCAACAGCTTCTATCTCAAAACATTCAAAATAATATTGCATCTCAACCTAACTTGCCACCCGTATCTGGTCTAACTCAGACTCCCATCGCGAATGGCCAGAATTCCAACATTCAAAATATGTTCAATGCTTCCCAAAGACAAATGCAAGGAAGGCAGCAGGTTGTTCCTCAACAACAGCAGCAGCAGCAGCAGCAATCACAGAATCCACAACAGTATCTGTACCAACAGCAGCTTTTGAGGCAAAAGCTTCAGATGCAATCTCAACAGCAGCAACAGCAACAGCACCACCAACAGCAGCAACAACAGCAACAGCAACAGCAGCAGCAGCAGAACCTTCTACAATCAAATCAGTTGCAATCTTCTCAGCAATCTGTCATGCAACAGCCTTCCATGATGCAAACATCTTCTTTATCTAGCATTCAGCACAATCAGCAATCTAATAATGGTCAACAGTCAACACAGTCCATGCTTCAGCAACACCCCCAGGTTATCAGGCAGCAGCAGCAACAACAGACTTCTATTATGCATCAGCAACAAACACCAATAACTCAACAGTCAATTTTGCCTCAACAACAGCAGCCGCAGCAACAGCTTATGGGTCAACAGGCAAATGCAACCAACATGCAACACAACCAGATACTTGGGCCACAGAATAATGTTGGTGATTTGCAGCAATCACAAAGGTTACTTGCCCAACAGAATAATCTTTCAAACTTGCAACAGCAGAAACTAATAAATCAGCAAAACAACCTATCAAATATAAATCAGCAGTTGGGAAATAATGCCCCTGGGTTACAGCCGCAACAGGTCCTTGGACCTCAATCTGGCAATTCAGGCATGCAGACAAGCCAGCACTCTGCACATGTGCTACAACAATCGAAGGTTCCAATGCAGCAACAATCACAACAAGGTGCATCAAATTTGTTACCATCTCAACCACAGCAGTCACAGCCACAAGCTCCGCAGCAGCAATTGATGCCACAGGTTCAATCTCAGCCTGCTCAATTGCAACAACAACCAAATCCCTTGCAACGAGATATGCAGCAAAGGCTTCAGGCATCGGGGTCCTTACTTCAACAATCGGGTGTTTTTGATCAACAAAAGCAGATATATCAATCACAAAGACCCCTCCCAGAAACTTCGTCAAATTCTATGGATTCAACAGCACAGACTGGACAGACAAGTGGGGGTGATTGGCAAGAAGAAGTGTATCAAAAAATCAAAGCTATGAAAGAGAGCTACTTGCCAGAGCTTAGCGAGATGTATCAGAAAATCGCAACGAAACTTCATCAGCATGATTCTCTTCCCCACCAGCCAAAGTCAGATCAGCTTGAAAAGCTGAAGGTATTTAAAATGATGCTGGAGCGTCTTATAACATTCCTCCAGGTTTCCAAGAGCAACATCTCACCTAGTTTGAAGGAGAAACTGGGTTCATATGAGAAGCAGATTATAAATTTCATAAATACAAACAGGCCTAGGAAAATTTCTTCATTGCAGCCAGGGCAGCTTCCCCCACCTCACATGCACTCCATGTCACAGACACAGCCCCAAGCTACTCAAGTGCAATCCCATGAAAATCAAATGAACACTCAGTTGCAAACCACCAACATGCAAGGCCCTGTACCAACAATGCAGCAGAATAATTTGACGAGCATGCAACATAGCTCTCTGTCTGGTGTATCTACAGCACAACAGAATATGATGAATACAATGCAACCTAGTGCCAGTTTGGATTTAGGACAAGGAAATATGAGCTCCCTTCAACAAAATTCCGTTACTGCTCCTCAACAAACTAATGTTAGCTCTTTATCTTCACAAGCGGGGGTAAATATGATCCAACAAAATCTTAATCCCCTTCAGCCAGGTTCTGGTATGCTTCAACACCAGCAACTGAAACAACAGCAGGAACAACAGATGTTGCAGAGTCAACAATTTAAACAACAATATCAACGACAACTAATGCAGAGGCAGCAAATGATACAGCAGCAGCAGTTGCACCAGCCAGCAAAACAACAGCTGCCTGCGCAAATGCAAACACATCAAATGCAACAACTTCACCAAATGAATGATGTAAATGACATGAAGATGAGGCAAGGAATTAATGCTAAGCCAGGGGTTTTTCAGCAACATCTTGCTTCCAGTCAACGCTCAGCTTATCCCCATCAACAGTTGAAACAAGGTCCTTTTCCCGTTTCTTCACCCCAACTCCTACAGGCTACATCTCCACAGATTTCACAACATTCGTCTCCCCAGGTTGATCAACAAAATCACCTCCCATCTGTGACAAAAGTTGGCACCCCTATGCAATCTGCTAACTCGCCTTTTATAATCCCCACTCCTTCACCTCCCTTAGCTCCATCTCCTATGCCAGGAGATTTTGAAAAGCCCATTTCTGGTGTTTCATCGATATCAAATGTTGCAAATGTTGGACACCAGCAAACAGGGAGTGGAGCAGCACCTGCTCAATCTCTTGCCATTGGAACTCCTGGAATATCAGCCTCTCCTTTACTGGCAGAGTTCACCGGTCCAGATGGTGCTCATGGTAATGCATTAGCGCCCTCTTCAGGAAAGTCAACTGTTACTGAGGAGCCTATGGACCGCCTAATTAAAGCGGTGAGTTCGTTGACCCCTGCGGCTTTAAGTGCAGCTGTCAGCGATATTAGTTCAGTTATCAGCATGAACGATAGGATAGCAGGGTCAGCTCCAGGCAATGGATCTAGAGCTGCTGTTGGTGAAGATTTGGTTGCCATGACTAATTGTCGCCTTCAGGCTAGAAATTTCATCACCCAAGATGGTGCGAATGGAACCAGGAGGATGAAACGCTGCACCAATGCTACACCCTTGAATGTTGTATCATCTGCTGGTAGTGTGAATGATAGTATCAAGTTAAATGGTATGGAGGCTTCTGATTTAGAGTCAACTGCAACATCCAATATCAAGAAGCCAAAGTTTGAGGCTAATCATGCCCTCCTGGAAGAAATTAGGGAGGTTAATCAGCGACTTATTGACACAGTAGTGAGCATAAGTGATGAAGAAGTTGATCAAACTGCAGCAGCAGCCGCTGCTGAAGGGGCAGAAGGGACTATTGTCAAATGTTCTTACATTGCCGTGGCTCTCAGTCCAAGTTTAAAAGCCCTATACGGTTCAGCTCAAATGTCGCCAATTCATCCCCTGCGCCTCCTTGTTCCTACAAATTATCCCAATTATTCTCCCATATTCCTCGACAAGTTTCCAGTTGAATCCAGTATTGAGAATGAAGATCTTTCTGCCAAAGCAAAGTCAAGGTTTAGCATATCATTACGAGGTTTTTCACAACCTATGTCTCTTAAAGAGATAGCAAAATCTTGGGATGTATGTGCTCGAACAGTTATTTCTGAGTATGCACAACAGAGTGGTGGAGGGACTTTCAGCTCTAAGTACGGCTCTTGGGAGGATTGCTCCACATGGTAA 3870 0.4411 MDTNNWRPNQGAEPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQRFEEKIYTAATSQSDYLRKISLKMLTMETKSQGTISNNIPPNQVGPSNQPPDPGLGIQSQVLNQGQQHPIPLPNQPQSRQQLLSQNIQNNIASQPNLPPVSGLTQTPIANGQNSNIQNMFNASQRQMQGRQQVVPQQQQQQQQQSQNPQQYLYQQQLLRQKLQMQSQQQQQQQHHQQQQQQQQQQQQQQNLLQSNQLQSSQQSVMQQPSMMQTSSLSSIQHNQQSNNGQQSTQSMLQQHPQVIRQQQQQQTSIMHQQQTPITQQSILPQQQQPQQQLMGQQANATNMQHNQILGPQNNVGDLQQSQRLLAQQNNLSNLQQQKLINQQNNLSNINQQLGNNAPGLQPQQVLGPQSGNSGMQTSQHSAHVLQQSKVPMQQQSQQGASNLLPSQPQQSQPQAPQQQLMPQVQSQPAQLQQQPNPLQRDMQQRLQASGSLLQQSGVFDQQKQIYQSQRPLPETSSNSMDSTAQTGQTSGGDWQEEVYQKIKAMKESYLPELSEMYQKIATKLHQHDSLPHQPKSDQLEKLKVFKMMLERLITFLQVSKSNISPSLKEKLGSYEKQIINFINTNRPRKISSLQPGQLPPPHMHSMSQTQPQATQVQSHENQMNTQLQTTNMQGPVPTMQQNNLTSMQHSSLSGVSTAQQNMMNTMQPSASLDLGQGNMSSLQQNSVTAPQQTNVSSLSSQAGVNMIQQNLNPLQPGSGMLQHQQLKQQQEQQMLQSQQFKQQYQRQLMQRQQMIQQQQLHQPAKQQLPAQMQTHQMQQLHQMNDVNDMKMRQGINAKPGVFQQHLASSQRSAYPHQQLKQGPFPVSSPQLLQATSPQISQHSSPQVDQQNHLPSVTKVGTPMQSANSPFIIPTPSPPLAPSPMPGDFEKPISGVSSISNVANVGHQQTGSGAAPAQSLAIGTPGISASPLLAEFTGPDGAHGNALAPSSGKSTVTEEPMDRLIKAVSSLTPAALSAAVSDISSVISMNDRIAGSAPGNGSRAAVGEDLVAMTNCRLQARNFITQDGANGTRRMKRCTNATPLNVVSSAGSVNDSIKLNGMEASDLESTATSNIKKPKFEANHALLEEIREVNQRLIDTVVSISDEEVDQTAAAAAAEGAEGTIVKCSYIAVALSPSLKALYGSAQMSPIHPLRLLVPTNYPNYSPIFLDKFPVESSIENEDLSAKAKSRFSISLRGFSQPMSLKEIAKSWDVCARTVISEYAQQSGGGTFSSKYGSWEDCSTW* 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3718 1289 MobiDBLite consensus disorder prediction 394 489 - -
Mtr2g3718 1289 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 232 1287 - -
Mtr2g3718 1289 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 1 234 - -
Mtr2g3718 1289 MobiDBLite consensus disorder prediction 93 120 - -
Mtr2g3718 1289 MobiDBLite consensus disorder prediction 252 321 - -
Mtr2g3718 1289 Gene3D Coactivator CBP, KIX domain 20 98 IPR036529 GO:0003712|GO:0006355
Mtr2g3718 1289 Coils Coil 768 788 - -
Mtr2g3718 1289 MobiDBLite consensus disorder prediction 631 654 - -
Mtr2g3718 1289 MobiDBLite consensus disorder prediction 850 905 - -
Mtr2g3718 1289 MobiDBLite consensus disorder prediction 513 539 - -
Mtr2g3718 1289 MobiDBLite consensus disorder prediction 1 24 - -
Mtr2g3718 1289 Coils Coil 228 248 - -
Mtr2g3718 1289 SUPERFAMILY Kix domain of CBP (creb binding protein) 18 91 IPR036529 GO:0003712|GO:0006355
Mtr2g3718 1289 MobiDBLite consensus disorder prediction 713 744 - -
Mtr2g3718 1289 Pfam KIX domain 19 98 IPR036546 -
Mtr2g3718 1289 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 1 234 IPR044661 GO:0003713|GO:0031490
Mtr2g3718 1289 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 232 1287 IPR044661 GO:0003713|GO:0031490
Mtr2g3718 1289 MobiDBLite consensus disorder prediction 152 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3718 Mtr-Chr2 51220829 51230748 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3718 K14972 - gmx:100783762 1321.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3718 2 51220829 51230748 Mtr4g0181 4 2174139 2185328 PCT