Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3980 ATGCTGAGGAAGAGAAGTAGGTCAATCCAGAAAGATCAACACCAAATGGGTCATCTGACAAATTCTGATACTAATTCTGATCATTATGCTCAATCTCATGCTTTAGGGCGTAATATCAAAGGCAATCCAATTTTCAATGTTCCTTGTTTGTTTGTGGGTTTAGGTCCAAAAGGGTTGTTGGATTCTGATTCAGTTAGAAGTCCAACTTCACCTCTAGATACTAGAGTTCTTTCAAATTCAGGTAACCCTGTTAGGAACCTAAGATCTTCACTCCTTGAGGGGAACCAAAGGAGTTGGGATAGTTGCAAAGTTGGTCTAAGTATTGTTGAATCTTTGGAAGATTGTAACTGTTCTAGGTTTTGTGGGAAAATTCTTCAATCACTTGATAGCAAGGGCATTAGTCTAAGTCCTCAATCTATGATCAAAACTCCAATTTGTGAAACTTGTATGGATTCTTTTGAGTCGTCGTCTAAGTCTTTGCCTAAAGATTTTGGTAAGGTGGTTCCTTGTGTAGAAGATGGATCTGTTATCCAAAAGGGTGAATGTGAGTCCAATGTCCTTTTTGAGATTGGTGAAACTAGCTTAGAGCATGATGAACCATTTGGGAGAACTAGGTCATGTTCATTGGATTCATGCAAATCAATGAAAGCTGATTTTGGATTAGCCACTTCAAAAACTGATTCTGATATCGATGATTTTGCTATGAAAGATGTCACAGTTCAGGTTAGCTCTTCTCCTCATTTTATTGGAGGAAGCCAGAACTCAAATGCATTCATACCGGCAGAGTCAAAATCAAACACTCTTTCCATATGTTCTTCCAGTGAGATTCTTAAGTCTCTATCAGCTAGTGAGATTGAGCTTTCTGAGGATTACACATGTGTGATTTCTCATGGTCCTAATCCCAAAACAACTCATATTTTTGGTGATTATATCTTGGAAACTCATCCTGATTTATCTATTAAGAATCATTTTAAGAATGAAGAGAATGAGAAGGAGAAAGGAGTGACCCTTATGGGTAACAAGTTATCACAGACTCCAAACCAATATCCCTCTAGTGCCTTCTTAAGTTTCTGCCACCATTGCGACAAGAAACTGGATGAAGGGAAAGACATTTATATCTATAGAGGTGAAAAAGCATTTTGCAGCTTAACTTGCCGTGCCATAGAGATTATGATTGATGAGGAACTTGAGAAATCCAACTCTCCTTGCGAGAACTCTGCAAAGCCAAAACTTGGTGAGCAAATTTTTGAAGCAGGCATCCCCACAACCACATAA 1275 0.3843 MLRKRSRSIQKDQHQMGHLTNSDTNSDHYAQSHALGRNIKGNPIFNVPCLFVGLGPKGLLDSDSVRSPTSPLDTRVLSNSGNPVRNLRSSLLEGNQRSWDSCKVGLSIVESLEDCNCSRFCGKILQSLDSKGISLSPQSMIKTPICETCMDSFESSSKSLPKDFGKVVPCVEDGSVIQKGECESNVLFEIGETSLEHDEPFGRTRSCSLDSCKSMKADFGLATSKTDSDIDDFAMKDVTVQVSSSPHFIGGSQNSNAFIPAESKSNTLSICSSSEILKSLSASEIELSEDYTCVISHGPNPKTTHIFGDYILETHPDLSIKNHFKNEENEKEKGVTLMGNKLSQTPNQYPSSAFLSFCHHCDKKLDEGKDIYIYRGEKAFCSLTCRAIEIMIDEELEKSNSPCENSAKPKLGEQIFEAGIPTTT* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3980 424 Pfam zinc-finger of the FCS-type, C2-C2 347 395 IPR007650 -
Mtr3g3980 424 MobiDBLite consensus disorder prediction 13 29 - -
Mtr3g3980 424 PANTHER DUF581 FAMILY PROTEIN 1 422 - -
Mtr3g3980 424 PANTHER FCS-LIKE ZINC FINGER 11 1 422 IPR044585 -
Mtr3g3980 424 ProSiteProfiles Zinc finger FLZ-type profile. 353 397 IPR007650 -
Mtr3g3980 424 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3980 Mtr-Chr3 53480592 53483518 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3980 - - gmx:100779553 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0166 1 1817631 1820547 Mtr3g3980 3 53480592 53483518 PCT