Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0166 ATGGCTTTAGGAAGCAATGAGAAAAGAAAATCAATTTTCAAAGCTCCTCTTCTGTATGTGGGACTTGGAATGGATTCTGATTCCCTTAGAAGCCCCACTTCACCACTAGATGATGTTACTTTGCTTTCAAATAGAGGTAACACTTTAAGAACATCACCACCTAATCAAGGACAAAAAAGGGGTTGGAACTGTACCAAAGTTGGTTTAAGTATCATAGATTCTTTGGAAGATTGTTCTAAATTTTCTAGGAATGTTCTTTTGTCATCTGAGTTTAACAAGGGTAGTTTCAGTCCTAATCCTAGTCCTCAAATGATTACCAAAGTCACTAATTGTAATCACTGTTTGGATTCTGTTATGGCTTCTAAATCCTTACCTAAAGATTTTTTTAAGCTTCCTTATACTAAAAATAATTCTGTTTTCCATAAGGGTGAGTCTAATGTTGTTTTTGAAATTGGTGAACCATTGCTTGAACATGAGTTGCCCTTTGGAAAATCAATGTCTTGTTCATTGGACTTATATAGTCCAATTAAAAATTCTAAGTTTGATTCAAAATGTGAGAATTTTTGTTTGAAACCAGTGAGTTTTCCAAACACATTGTTACCTGTGTCGCTATCTGCAAGTGAGATTGAAAACTCTGAGGACTATACATGTGTGATTTCACACGGTCCTAATCCGAAGAAAACACATATTTTCTGTGACTGCATCTTAGAAGTTCATGCTGATGATGATGTTAAAAAACATCAAAATAAGAATGAAGAGGAGGGTTCGTCTTCTCCTGTGGTTGGCAGATTAGAGACCCCGAACCAATTTCCGTCTGCTGAGTTTTTAACTTTCTGCAATCATTGCAACAAGAAATTGGATGAGGGGAAAGATATTTACATATACAGAGGTGAAAAGTCATTTTGCAGTTTAGCTTGCCGTGCTTTTGAGATTATGATTGATGAGGAGCTAGAGAAATCCAATGAACCACCTGAAAACTCTATAGAGTTGGAATCTGGTGAAGAACATTTTGGATCTGGCATCTTCACTGCTGTATAG 1038 0.3613 MALGSNEKRKSIFKAPLLYVGLGMDSDSLRSPTSPLDDVTLLSNRGNTLRTSPPNQGQKRGWNCTKVGLSIIDSLEDCSKFSRNVLLSSEFNKGSFSPNPSPQMITKVTNCNHCLDSVMASKSLPKDFFKLPYTKNNSVFHKGESNVVFEIGEPLLEHELPFGKSMSCSLDLYSPIKNSKFDSKCENFCLKPVSFPNTLLPVSLSASEIENSEDYTCVISHGPNPKKTHIFCDCILEVHADDDVKKHQNKNEEEGSSSPVVGRLETPNQFPSAEFLTFCNHCNKKLDEGKDIYIYRGEKSFCSLACRAFEIMIDEELEKSNEPPENSIELESGEEHFGSGIFTAV* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0166 345 PANTHER FCS-LIKE ZINC FINGER 11 3 343 IPR044585 -
Mtr1g0166 345 MobiDBLite consensus disorder prediction 29 60 - -
Mtr1g0166 345 Pfam zinc-finger of the FCS-type, C2-C2 269 316 IPR007650 -
Mtr1g0166 345 PANTHER FCS-LIKE ZINC FINGER 11 3 343 - -
Mtr1g0166 345 ProSiteProfiles Zinc finger FLZ-type profile. 274 318 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0166 Mtr-Chr1 1817631 1820547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0166 - - cam:101497948 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0166 1 1817631 1820547 Mtr1g0166 1 1817631 1820547 ECH
Mtr1g0166 1 1817631 1820547 Mtr3g3980 3 53480592 53483518 PCT