Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3925 ATGGGTAGGAACAAAATCCAACTTTTTGATGACAAAAGAGATGTGTTTTTCTCTGTTTCTAATTTATTTTCTCAATCTCATGAGTATTACTATTATCCTTGTGGTTTGTTTGCTAGTGTTGGTCAAGTCGGAATAGGTTTTGGTGTTCCACAACCAAACCCTTCTGATTCTAATTCCCCTGAAAATGTTGATGACCCTAAATTTCCTTTCAGTGAATTATACGTTAAGTATATTCAATCACTGTTGAAATTCGAGCCTAATGGTGTTACAGGGAAGGGGGAAGGTGAAGAAGTTGTTAAGGTGAAGAATAAAAATGGTGGGTTTAAGCTCAAGATTAAGATAAGGAATCCTTCTATTAGGAGGTTGTGTAGTGGAGCAATAGCTGGTGCAATTTCTAGAACCACTGTGGCACCTTTGGAGACTATTAGGACTCATTTGATGGTGGGAAGTAGTGGTCATTCTACTGCTGAGGTTTTCCAGGATATTATGAAAACTGATGGATGGAAGGGTTTGTTTAGGGGAAATCTTGTTAATGTCATTCGGGTTGCTCCTAGCAAGGCCATTGAGCTATTTGCTTATGATACGGTAAACAAGAACCTATCCGCAAAGCCTGGAGAGCAGTCCAAACTCTCAGTTCCTGCATCGTTGATTGCAGGTGCCTGTGCTGGAGTCAGTTCAACTATATGCACGTATCCGCTTGAACTACTCAAGACTAGACTAACTATCCAGAGAGGTGTTTACAATGGTCTCCTTGACGCTTTCGTGAAAATAATTAAAGAAGAGGGCCCTGCAGAACTTTACAGAGGCCTGACACCTAGTCTTATTGGAGTTATTCCATATTCGGCTACCAATTACTTTGCCTACGACACTCTGCGGAAAGCATACCGGAAAATTTTCAAACAAGAGAAGATCGGCAACTTTGAAACCCTTTTGATTGGTTCAGCGGCTGGTGCTATTTCAAGTACTGCAACTTTTCCACTTGAGGTGGCTCGCAAGCATATGCAAGTTGGAGCTCTCAGTGGAAGACAGGTCTACAAAAATGTGGTTCATGCCCTTGTTAGCATACTAGAACAAGAAGGGATCCAGGGTCTATATAGAGGGCTTGGACCTAGTTGCATGAAGTTAGTGCCAGCCGCTGGAATCTCTTTCATGTGTTACGAAGCATGCAAGAAGATATTGATAGATAATGACGAGGAGGAATAG 1203 0.4165 MGRNKIQLFDDKRDVFFSVSNLFSQSHEYYYYPCGLFASVGQVGIGFGVPQPNPSDSNSPENVDDPKFPFSELYVKYIQSLLKFEPNGVTGKGEGEEVVKVKNKNGGFKLKIKIRNPSIRRLCSGAIAGAISRTTVAPLETIRTHLMVGSSGHSTAEVFQDIMKTDGWKGLFRGNLVNVIRVAPSKAIELFAYDTVNKNLSAKPGEQSKLSVPASLIAGACAGVSSTICTYPLELLKTRLTIQRGVYNGLLDAFVKIIKEEGPAELYRGLTPSLIGVIPYSATNYFAYDTLRKAYRKIFKQEKIGNFETLLIGSAAGAISSTATFPLEVARKHMQVGALSGRQVYKNVVHALVSILEQEGIQGLYRGLGPSCMKLVPAAGISFMCYEACKKILIDNDEEE* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3925 400 PANTHER SOLUTE CARRIER FAMILY 25 25 399 - -
Mtr3g3925 400 Gene3D Mitochondrial carrier domain 113 398 IPR023395 -
Mtr3g3925 400 PRINTS Mitochondrial carrier protein signature 121 134 IPR002067 GO:0055085
Mtr3g3925 400 PRINTS Mitochondrial carrier protein signature 134 148 IPR002067 GO:0055085
Mtr3g3925 400 PRINTS Mitochondrial carrier protein signature 174 194 IPR002067 GO:0055085
Mtr3g3925 400 PRINTS Mitochondrial carrier protein signature 225 243 IPR002067 GO:0055085
Mtr3g3925 400 PRINTS Mitochondrial carrier protein signature 267 285 IPR002067 GO:0055085
Mtr3g3925 400 PRINTS Mitochondrial carrier protein signature 313 335 IPR002067 GO:0055085
Mtr3g3925 400 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 199 IPR018108 -
Mtr3g3925 400 SUPERFAMILY Mitochondrial carrier 117 388 IPR023395 -
Mtr3g3925 400 ProSiteProfiles Solute carrier (Solcar) repeat profile. 304 392 IPR018108 -
Mtr3g3925 400 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 294 IPR018108 -
Mtr3g3925 400 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 25 399 - -
Mtr3g3925 400 Pfam Mitochondrial carrier protein 303 396 IPR018108 -
Mtr3g3925 400 Pfam Mitochondrial carrier protein 118 201 IPR018108 -
Mtr3g3925 400 Pfam Mitochondrial carrier protein 209 297 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3925 Mtr-Chr3 53038225 53041740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3925 1 399 Organic Solute Cotransporters AT4G32400 65.926 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3925 K14684 - qsu:111999876 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3925 3 53038225 53041740 Mtr3g3925 3 53038225 53041740 ECH
Mtr1g0207 1 2364496 2368029 Mtr3g3925 3 53038225 53041740 PCT