Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0207 ATGGGTTTCAAAGGAATCAACAAAAACAATCCCTTTGATGACAAAAGAAACAATTTTTTCTCAATCTCCAATTTAGGTTCTCAATGGAATAACCATCATGAAGAACAACAAGGGTACCCTTATCCTATTGGTGGTTTATTTGCAAGCATGAGTAGTAGTCAAATGGGACCAGGTTTTGGTGCTGCTGCTGGTGGAATTCCACAACCAAACCCATCTTCAGATTCATCTCCTCAACGAAACAATGGTATGAAAATCCCCTGCACTGAGTTGTACGTAAGGTATGTACAATCAGAAGGTAAAGTTAAGATTCTTGGTGTTCCTGATGAACAAGATGAGATTCTTGGTGTTGATAAAAAGAAAAAGGGTGGTCTTAAAAAGTTTAAGATTAAGGTAAAAAACCCATCTTTGAGAAGATTGATTAGTGGGGCTTTTGCTGGGGCTGTTTCTCGTACTGCTGTTGCACCTTTGGAAACTATTAGGACTCATTTGATGGTTGGAACTAGTGGTCATTCTAGTGGTGAGGTTTTCAGTGATATCATGAAGACTGATGGATGGAAAGGCTTGTTTAGAGGGAATTTTGTTAATGTTATTAGGGTTGCACCTAGCAAGGCTATTGAGCTATTTGCTTATGATACAGTTAAGAAGAACCTCTCATCAAAGCCCGGGGAAAAGCCAAAAATCCCAATTTCTCCGTCATTGGTAGCAGGCGCTTGTGCTGGAGTTAGTTCAACTATTGTCACATATCCTCTGGAATTACTCAAGACTAGATTAACTGTCCAGAGAGGTGTTTATAACGGTCTATTTGACGCGTTCGTGAAAATAATTCGAGAAGAGGGTGCTTCAGAACTTTACAGAGGCCTTGCACCTAGTCTTATTGGAGTCATTCCATATTCTGCTACCAACTACTTTGCCTATGACACTTTAAGGAAAGTTTACAAGAAAGTTTTTAAACAAGAGAAGATTGGAAACATCGAAACCCTTTTGATAGGATCTGCGGCCGGTGCTATTTCAAGTACCGCTACTTTTCCGCTTGAAGTGGCTCGCAAGCAAATGCAAGTGGGAGCACTCAGTGGAAGACAAGTTTACAAGAATGTGATTCATGCACTTGCATGCATACTTGAGAAAGAAGGTATCCAAGGTTTGTATAGGGGATTGGGACCAAGCTGCATGAAGTTGGTTCCGGCTGCTGGAATCTCTTTCATGTGTTATGAAGCATGCAAGAGGATATTGGTGGAGGAAGATGATGAAGAAAATAATGAGTAG 1263 0.4046 MGFKGINKNNPFDDKRNNFFSISNLGSQWNNHHEEQQGYPYPIGGLFASMSSSQMGPGFGAAAGGIPQPNPSSDSSPQRNNGMKIPCTELYVRYVQSEGKVKILGVPDEQDEILGVDKKKKGGLKKFKIKVKNPSLRRLISGAFAGAVSRTAVAPLETIRTHLMVGTSGHSSGEVFSDIMKTDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVKKNLSSKPGEKPKIPISPSLVAGACAGVSSTIVTYPLELLKTRLTVQRGVYNGLFDAFVKIIREEGASELYRGLAPSLIGVIPYSATNYFAYDTLRKVYKKVFKQEKIGNIETLLIGSAAGAISSTATFPLEVARKQMQVGALSGRQVYKNVIHALACILEKEGIQGLYRGLGPSCMKLVPAAGISFMCYEACKRILVEEDDEENNE* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0207 420 Gene3D Mitochondrial carrier domain 129 415 IPR023395 -
Mtr1g0207 420 PRINTS Mitochondrial carrier protein signature 138 151 IPR002067 GO:0055085
Mtr1g0207 420 PRINTS Mitochondrial carrier protein signature 151 165 IPR002067 GO:0055085
Mtr1g0207 420 PRINTS Mitochondrial carrier protein signature 191 211 IPR002067 GO:0055085
Mtr1g0207 420 PRINTS Mitochondrial carrier protein signature 242 260 IPR002067 GO:0055085
Mtr1g0207 420 PRINTS Mitochondrial carrier protein signature 284 302 IPR002067 GO:0055085
Mtr1g0207 420 PRINTS Mitochondrial carrier protein signature 330 352 IPR002067 GO:0055085
Mtr1g0207 420 SUPERFAMILY Mitochondrial carrier 134 405 IPR023395 -
Mtr1g0207 420 ProSiteProfiles Solute carrier (Solcar) repeat profile. 321 409 IPR018108 -
Mtr1g0207 420 ProSiteProfiles Solute carrier (Solcar) repeat profile. 227 311 IPR018108 -
Mtr1g0207 420 MobiDBLite consensus disorder prediction 58 82 - -
Mtr1g0207 420 Pfam Mitochondrial carrier protein 134 219 IPR018108 -
Mtr1g0207 420 Pfam Mitochondrial carrier protein 227 314 IPR018108 -
Mtr1g0207 420 Pfam Mitochondrial carrier protein 321 412 IPR018108 -
Mtr1g0207 420 ProSiteProfiles Solute carrier (Solcar) repeat profile. 133 216 IPR018108 -
Mtr1g0207 420 PANTHER ADENINE NUCLEOTIDE TRANSPORTER BT1, CHLOROPLASTIC/MITOCHONDRIAL 42 416 - -
Mtr1g0207 420 MobiDBLite consensus disorder prediction 68 82 - -
Mtr1g0207 420 PANTHER SOLUTE CARRIER FAMILY 25 42 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0207 Mtr-Chr1 2364496 2368029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0207 320 418 Organic Solute Cotransporters AT4G32400 30.097 3.40e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0207 K14684 - gmx:100816041 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0207 1 2364496 2368029 Mtr1g0207 1 2364496 2368029 ECH
Mtr1g0207 1 2364496 2368029 Mtr3g3925 3 53038225 53041740 PCT