Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3917 ATGAAGTTCTGGAAGATCTTGAAGAGCCAAATCGAGCAGACCCTGCCCGAATGGCGCGACCAGTTCTTGTCCTACAAAAACTTGAAGAAACAGTTGAAGGCTATGTGTCCCAAAGATGCTCACACCCCTCCCATATGGGATGCTCACCAGGTCAGCCACTTCCTTTGCCTATTGGAGGTTGAGATTGACAAGTTCAACACTTTCTTTGTTAACAAGGAAGAAGAATACATCATCAAATGGAAGGAGTTGCAAGACAGAGTTGACAGGGTCATGGATTATTCAGATTTGGAGTTGATGTCATTATGGAGGGAAATAGTTGACTTCCATGGGGAGATGGTTTTGTTGGAGAACTATAGTGCACTTAACTACACAGGTTTAGTGAAGATAATAAAGAAACACGATAAGCGAACTGGTGGACTACTTCGCTTGCCGTTTATCCAAGAGGTTCTGAACCAGCCCTTTTTCGAAACTGATGTGCTTAACAACCTTGTTAAGGAGTGTGAGGTGCTACTGAACATTCTTTTTACCAACAATGATAGCCCTTCTTGCCCTTGCACATCAACTAGTGAGGAAAATGAAGAAAATAAAGAGAAGCTGATGCAGGTTCCTGAAGAAATTGCTGAAATTGAAAATATGGAGAATGTGCTCATCAAGCTAACTTTATCAGCATTGCGTACCTTGGAAGAAATTCGCGGTCAAAGCTCAACAAAGCAAGGGGTAAAAACTAAAACGTCAGGTGAAGCTTGTGGAGACAAGGAAAAGGTAGCACATTCATAG 777 0.4221 MKFWKILKSQIEQTLPEWRDQFLSYKNLKKQLKAMCPKDAHTPPIWDAHQVSHFLCLLEVEIDKFNTFFVNKEEEYIIKWKELQDRVDRVMDYSDLELMSLWREIVDFHGEMVLLENYSALNYTGLVKIIKKHDKRTGGLLRLPFIQEVLNQPFFETDVLNNLVKECEVLLNILFTNNDSPSCPCTSTSEENEENKEKLMQVPEEIAEIENMENVLIKLTLSALRTLEEIRGQSSTKQGVKTKTSGEACGDKEKVAHS* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3917 258 Pfam SPX domain 1 34 IPR004331 -
Mtr3g3917 258 Pfam SPX domain 103 149 IPR004331 -
Mtr3g3917 258 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 244 IPR031142 GO:0016036
Mtr3g3917 258 MobiDBLite consensus disorder prediction 232 258 - -
Mtr3g3917 258 PANTHER SPX DOMAIN-CONTAINING PROTEIN 1 1 244 - -
Mtr3g3917 258 CDD SPX_AtSPX1_like 2 136 - -
Mtr3g3917 258 ProSiteProfiles SPX domain profile. 1 147 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3917 Mtr-Chr3 52998430 52999992 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3917 - - mtr:MTR_3g107393 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3917 3 52998430 52999992 Mtr3g3917 3 52998430 52999992 ECH
Mtr3g3917 3 52998430 52999992 Mtr1g0220 1 2509341 2513211 ECH