Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0220 ATGAAGTTCTGGAAGATTCTCAACAACCAGATCGAGCAAACGTTACCTGATTGGCGTGATAAGTTTCTTTCCTACAAGGATCTTAAGAAGCAGTTGAAACTCATTGTTCCTAAAGAGATTGATTCTTCTTGTTCTAAACGGCGTCGTTTGGATGATGATGGTGGTGCTGAAGGAGAGGTTACGAAAGAGGTTAAAGATTTTCTTAGGTTGTTGGAGGTTGAAATTGAGAAATTTAATGGCTTTTTTGTTGAGAAAGAAGAAGAATATGTTATCAAATGGAAGGAATTGCAAGACAAAGTTGCCTGGGCCAAGAGTTCTGATATCGAGTTGATGACAGTAGGGAGGGAAATAGTGGATTTTCATGGAGAGATGGTTTTGTTAGAGAACTATAGTGCACTTAACTACACAGGTTTGGTTAAGATAATAAAGAAATATGATAAGCGAACTGGTGCACTACTTCGGTTACCTTTTATCCAAGATGTCTTGAACCAGCCATTCTTCAAAATCGATGTGCTTAACAAGCTTGTGAAGGAGTGTGAGGTGATGCTAAGCATTATTTTCCCCAAAAGTGGGCCTCTAGGGCAATCCTTATCAACAAGTGAGGTTTTTGAGGAAGTTGCGCGTGAGACCACGACTGCAAATGAAACTAAGGAGACACTAGACCATGTCCCAAAAGAATTTTCTGAGATCCAAAATATGGAGAACATTTTCATCAAACTAACTACATCAGCACTGGATACTCTGAAAGAGATTAGGGGTGGAAGCTCAACTGTAAGCATATACTCATTGCCTCCTCTGCATAGCGAGACTTTGGTAGAGGATTGA 825 0.3988 MKFWKILNNQIEQTLPDWRDKFLSYKDLKKQLKLIVPKEIDSSCSKRRRLDDDGGAEGEVTKEVKDFLRLLEVEIEKFNGFFVEKEEEYVIKWKELQDKVAWAKSSDIELMTVGREIVDFHGEMVLLENYSALNYTGLVKIIKKYDKRTGALLRLPFIQDVLNQPFFKIDVLNKLVKECEVMLSIIFPKSGPLGQSLSTSEVFEEVARETTTANETKETLDHVPKEFSEIQNMENIFIKLTTSALDTLKEIRGGSSTVSIYSLPPLHSETLVED* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0220 274 ProSiteProfiles SPX domain profile. 1 159 IPR004331 -
Mtr1g0220 274 PANTHER SPX DOMAIN-CONTAINING PROTEIN 1 1 269 - -
Mtr1g0220 274 CDD SPX_AtSPX1_like 2 148 - -
Mtr1g0220 274 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 269 IPR031142 GO:0016036
Mtr1g0220 274 Pfam SPX domain 116 160 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0220 Mtr-Chr1 2509341 2513211 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0220 - - adu:107495354 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0220 1 2509341 2513211 Mtr1g0220 1 2509341 2513211 ECH
Mtr3g3917 3 52998430 52999992 Mtr1g0220 1 2509341 2513211 ECH