Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3909 ATGGATCCAGTTAACACTTCACTGGAAGATGGACTTCATCAACAACAACTCTTTAATTCACAACAGGATGCTGTTGATTTCAATGTTGTTACTCAAATTAAACAAACTGTACTGTCTAATGGAAATTTCAACGATAATGTCTCTATGGAAGAAGAAGAAGAAGAAGGATCAAATGGCAAAATAGAGGGAAACAATGTTAATGTTTCTAAGGAAGTGGAAATTGAAATCGTTGATGAAACGGAGAAATCTAGGACAAAAAAGGATCTTGTCAAGAATAACAATTCAAAATTGCCAAGTCCTAGAGGTCTTCGTATGACTTCGGTGAGAAAGAACAAAGACGGAAAAGATGAAGAGGCTGCAGTAGCATCATCTGTTTCAAATGGTACTTCCACTTTCGACTCTCATCCAAGACAGCCGGTTAACAACAGGGCAGTCAATGACAAGCAGACCCACCTGTCCAAGCACTCTGGAAAGACTGATGCTGCATCTACTGAAGCACCAATGGAGAAGACTAGACCACACTTGATAAAGAAAGAACCCCTTGATAATCTTCCAGGAAAAGCTGAATCATCTTTTCCTACATCAGAAGATGCCAAACCTCGTAGAGTTGGGACAATGCCAACTTATGGATTCAGTTTCAAATGTAATGAGCGAGCTGAGAGAAGAAAAGAGTTTTACTCTAAGCTTGAGGAAAGGATTCATGCGAAGGAAGTGGAGGAGAGCAACATTCAAGCAAAAACCAAGGAGAGCCAAGAAGCTGAGATTAAGAGGCTTAGGAAAAAACTAGCATTTAAAGCAACTCCAATGCCAAGCTTCTACCAGGAGCCTACTCCTTCTAGGGTGGAGTTGAAGAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTTGGTCGTAAGAAGAGTTCAACAATGTCCTCAGAGCTAGATGTAAACAGTAACAGCAGTGCTCAACAATGCCGTTTAAGTCTGGATGAGAAAGTGTCTCAGAATAATCCCACTAAAGGAATTAGTCATGTTCAGCCAAAGAAGCCACAAAGAAGATCTCTCCCTCCTCGACTGACTCCTGAAAGGATCAGTTCATCCAATTCAGTGACTGCACGGACTTCATCTAAGGCGGTGCATGACGAGAAAACCTCCTTATCTAGTGTAACAACTGAAGTTACCACCTTGTCCGTTGCAACAAGGGAAGAGAAAGTTGAAGCAGCTGCAGCTATTGAGGAGAACAGTGCCTTCTCTGATGAGACAAGTGGAACTCCGTCTCTGAACATAGAGCCGGATGTAGCAGAATCTCAATTGAATGGTGATATAGTGATTGAAGACAAACCACAACTCATTTTGGTACAAGAACCCATAGCAGGATAG 1362 0.417 MDPVNTSLEDGLHQQQLFNSQQDAVDFNVVTQIKQTVLSNGNFNDNVSMEEEEEEGSNGKIEGNNVNVSKEVEIEIVDETEKSRTKKDLVKNNNSKLPSPRGLRMTSVRKNKDGKDEEAAVASSVSNGTSTFDSHPRQPVNNRAVNDKQTHLSKHSGKTDAASTEAPMEKTRPHLIKKEPLDNLPGKAESSFPTSEDAKPRRVGTMPTYGFSFKCNERAERRKEFYSKLEERIHAKEVEESNIQAKTKESQEAEIKRLRKKLAFKATPMPSFYQEPTPSRVELKKIPTTRAKSPKLGRKKSSTMSSELDVNSNSSAQQCRLSLDEKVSQNNPTKGISHVQPKKPQRRSLPPRLTPERISSSNSVTARTSSKAVHDEKTSLSSVTTEVTTLSVATREEKVEAAAAIEENSAFSDETSGTPSLNIEPDVAESQLNGDIVIEDKPQLILVQEPIAG* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3909 453 Pfam Targeting protein for Xklp2 (TPX2) domain 211 282 IPR027329 -
Mtr3g3909 453 Coils Coil 226 256 - -
Mtr3g3909 453 MobiDBLite consensus disorder prediction 165 184 - -
Mtr3g3909 453 MobiDBLite consensus disorder prediction 269 377 - -
Mtr3g3909 453 MobiDBLite consensus disorder prediction 298 338 - -
Mtr3g3909 453 MobiDBLite consensus disorder prediction 354 377 - -
Mtr3g3909 453 MobiDBLite consensus disorder prediction 78 203 - -
Mtr3g3909 453 PANTHER PROTEIN WVD2-LIKE 5-RELATED 4 445 - -
Mtr3g3909 453 MobiDBLite consensus disorder prediction 122 147 - -
Mtr3g3909 453 PANTHER PROTEIN WVD2-LIKE 4 4 445 IPR044833 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3909 Mtr-Chr3 52924947 52929565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3909 - - gmx:100804879 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3909 3 52924947 52929565 Mtr3g3909 3 52924947 52929565 ECH
Mtr1g0226 1 2556109 2561636 Mtr3g3909 3 52924947 52929565 PCT