Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0226 ATGATGGATCCAGTTAACTCTTTGCCTGCTGATGGACTTGATGATGTCCACCAAAACGGTGTTCATGATGAACCTTCTAATTCGGGAGAGGACGCTGTTTCAAATGATTTAGACCCCCATGTTACTGTAAATACAGAAACTTTTGTTCCAGATGGAAATTCTGAAAATATCAATCAGTTGGAAAGCACTGCAACTGGAAACTCGGCTATGAAGGAAATCGAAGGATCGAATGACAACGTGGATGGCAGTAATTTGACTGTTTCAAAGGAAAAGGAAGTGAAAATAAAAGTTTCAACAGAACAGTCAAGAGCACAAAAGGGTCCTGTCAAGAATAAGAATGCAAAGGTTGGCAGTTCCAGCGGTGTTAATGCAAGTTTGGTGAAAAACAGCAAAATTGGAAAAGACAAACAGGCATCGCCCGCTGTTTCAAATGGCACTTCTGCTCTAGACTCTCGCCCAAGACAGCCTATTAAAAACCGCTCATCCAATGATCGGCAGTCTCAATTGTCCAAGCAACCTTCAAAGTCTGAAGCAGCGTCTTCTGATGTTGCAGTGGAGAAGAAAAAGCCAAAATCATTGAAAAAGGGACCTCTTGATAAAGTTCAAGGAGAAGGAGAATCTTCTCTTACCAACAGAGAAGATACCAAACCTCGCAGGGTGGGGACACTTCCAAATTATGGGTTCAGTTTCAGGTGTGGTGAACGAGCTGAGAAAAGGAGAGAGTTCCTCACTAAGGTTGAGGAAAAGATTCAGGCAAAGGAGGAGGAGAAGAGTAGCTTGCAAGCAAAATCCAAGGAGAGTCAAGAAGCCGAGATTAAAAAGCTTAGGAAGAGCCTAACTTTTAAAGCAACTCCATTACCAACTTTCTATCAGGAGCCTGCTCCTCCTAAGGTGGAGCTGAAGAAGATACCAACTACTAGAGCAAAATCTCCCAAGCTCGGTCGGAAGAAGACTTCAACAAATTCAGAATCTGATGGAAACGGTAGCTGCAGTTCTCGACAAGGTCGTTTAAGTCTGAATGAGAAAGTGTCACAGAGCAACTCCCCTACAGGAGTTACCCTTGCCCATCAAAAGAAGCCGTTACGGAAGTCCCTTCCTACTCGACTCGCTTCTGAAAGGACCAATTCAGCAGCTGCACCTACATCTAAGGCAACAAAGAAAGATACTAGCTTATCCAAAGGTACAGGGGAAGAGAAAACTGAGATTGTCACAGCCAATGAAGAAAACAGTACCTTGTCAAGTGACACAAATGTTGCTCTACCTCAGAATGCGGTTCCTTCAGATAAACCAAGTGAAGAATTTCATGTGAATGGGGACATAGTGGTTGAAGAGAATCCTCAGCTCGTGTTGTCACAAGAACCGATCATGACTGTGCATTGA 1380 0.4348 MMDPVNSLPADGLDDVHQNGVHDEPSNSGEDAVSNDLDPHVTVNTETFVPDGNSENINQLESTATGNSAMKEIEGSNDNVDGSNLTVSKEKEVKIKVSTEQSRAQKGPVKNKNAKVGSSSGVNASLVKNSKIGKDKQASPAVSNGTSALDSRPRQPIKNRSSNDRQSQLSKQPSKSEAASSDVAVEKKKPKSLKKGPLDKVQGEGESSLTNREDTKPRRVGTLPNYGFSFRCGERAEKRREFLTKVEEKIQAKEEEKSSLQAKSKESQEAEIKKLRKSLTFKATPLPTFYQEPAPPKVELKKIPTTRAKSPKLGRKKTSTNSESDGNGSCSSRQGRLSLNEKVSQSNSPTGVTLAHQKKPLRKSLPTRLASERTNSAAAPTSKATKKDTSLSKGTGEEKTEIVTANEENSTLSSDTNVALPQNAVPSDKPSEEFHVNGDIVVEENPQLVLSQEPIMTVH* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0226 459 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 449 - -
Mtr1g0226 459 MobiDBLite consensus disorder prediction 181 219 - -
Mtr1g0226 459 MobiDBLite consensus disorder prediction 85 99 - -
Mtr1g0226 459 MobiDBLite consensus disorder prediction 1 229 - -
Mtr1g0226 459 Coils Coil 243 273 - -
Mtr1g0226 459 MobiDBLite consensus disorder prediction 249 432 - -
Mtr1g0226 459 MobiDBLite consensus disorder prediction 22 84 - -
Mtr1g0226 459 MobiDBLite consensus disorder prediction 390 404 - -
Mtr1g0226 459 MobiDBLite consensus disorder prediction 315 354 - -
Mtr1g0226 459 MobiDBLite consensus disorder prediction 368 389 - -
Mtr1g0226 459 MobiDBLite consensus disorder prediction 100 179 - -
Mtr1g0226 459 Pfam Targeting protein for Xklp2 (TPX2) domain 228 299 IPR027329 -
Mtr1g0226 459 PANTHER PROTEIN WVD2-LIKE 4 2 449 IPR044833 GO:0008017
Mtr1g0226 459 MobiDBLite consensus disorder prediction 405 424 - -
Mtr1g0226 459 MobiDBLite consensus disorder prediction 249 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0226 Mtr-Chr1 2556109 2561636 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0226 - - gmx:100786958 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0226 1 2556109 2561636 Mtr1g0226 1 2556109 2561636 ECH
Mtr1g0226 1 2556109 2561636 Mtr3g3909 3 52924947 52929565 PCT